RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 KLHL18O94889 574 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 C8orf89P0DMQ9 161 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 SOX9P48436 509 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 QPCTQ16769 361 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 SLC22A15Q8IZD6 547 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 OR2AJ1Q8NGZ0 328 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 MYLIPQ8WY64 445 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 VRTNQ9H8Y1 702 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 SLCO1B3Q9NPD5 702 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 KPNA4O00629 521 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 AP1S2P56377 157 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 DYNC1I2Q13409 638 aaKnown RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 PTGES3Q15185 160 aaKnown RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF57Q68EA5 555 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 OR52J3Q8NH60 311 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 FIBINQ8TAL6 211 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 MRPL38Q96DV4 380 aaKnown RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 PLEKHA1Q9HB21 404 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF282Q9UDV7 671 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 PCDHGA2Q9Y5H1 932 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 DHRS12A0PJE2 317 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 RIIAD1A6NNX1 92 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 HNRNPA2B1P22626 353 aaKnown RBP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 HERVK_113P63132 956 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 OGDHQ02218 1023 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 ID2Q02363 134 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 DECR1Q16698 335 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 DCST1Q5T197 706 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 NXPE1Q8N323 547 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 C11orf65Q8NCR3 313 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 TRPV3Q8NET8 790 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 TP53INP1Q96A56 240 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 ERVK-6Q9BXR3 956 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 CRISPLD1Q9H336 500 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 COL22A1Q8NFW1 1626 aaPredicted RBP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 LOC100506127A0A0U1RQW1 187 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 CENPXA8MT69 81 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 FAM72CH0Y354 149 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 TRIM24O15164 1050 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 RPS14P62263 151 aaKnown RBP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 MAPK14Q16539 360 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 SMU1Q2TAY7 513 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 FAM72AQ5TYM5 149 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 FAM72DQ6L9T8 149 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 Q6ZSR6 202 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 FAM72BQ86X60 149 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 GJD3Q8N144 294 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 PIGXQ8TBF5 258 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 DUSP26Q9BV47 211 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 C12orf65Q9H3J6 166 aaKnown RBP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 MAGEL2Q9UJ55 1249 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 ELOVL7A1L3X0 281 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 CDC40O60508 579 aaKnown RBP eCLIP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 JUNP05412 331 aaKnown RBP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 S100GP29377 79 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 YAP1P46937 504 aaKnown RBP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 DEFB133Q30KQ1 61 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 CYP27C1Q4G0S4 372 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 NCEH1Q6PIU2 408 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 GALNT5Q7Z7M9 940 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 PEG10Q86TG7 708 aaKnown RBP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 HIST1H2AAQ96QV6 131 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 DGCR6LQ9BY27 220 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 HAPLN2Q9GZV7 340 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 MAGEE1Q9HCI5 957 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 RAPGEFL1Q9UHV5 662 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 CNTN6Q9UQ52 1028 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 COL18A1P39060 1754 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 ADAMTS4O75173 837 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 OR2B3O76000 313 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 AP2A2O94973 939 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 CHRM1P11229 460 aaPredicted RBP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 CDKN1CP49918 316 aaPredicted RBP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 PRKD1Q15139 912 aaPredicted RBP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 FAM174BQ3ZCQ3 159 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 KCTD8Q6ZWB6 473 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 KLHDC9Q8NEP7 349 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 PIH1D2Q8WWB5 315 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 EZH1Q92800 747 aaPredicted RBP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF717Q9BY31 904 aaPredicted RBP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 RARRES3Q9UL19 164 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 MED31Q9Y3C7 131 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 GBAP04062 536 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF823P16415 610 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 PCDH1Q08174 1060 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF234Q14588 700 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 SMARCD3Q6STE5 483 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 TMIGD1Q6UXZ0 262 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 ERGIC3Q9Y282 383 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 SNX4O95219 450 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 ACRV1P26436 265 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 RPS13P62277 151 aaKnown RBP10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 WASHC2DQ5SRD0 308 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 VWA5B1Q5TIE3 1220 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 NIPAL1Q6NVV3 410 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 LRRTM3Q86VH5 581 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 SLC2A13Q96QE2 648 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 OR8D2Q9GZM6 311 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms