RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 TFB2MQ9H5Q4 396 aaKnown RBP14.21□□□□□ -0.13
PTPN9-201ENST00000306726 ATP13A3Q9H7F0 1226 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 SLC22A14Q9Y267 594 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 MAP4K5Q9Y4K4 846 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 NIPAL1Q6NVV3 410 aa14.21□□□□□ -0.14
PTPN9-201ENST00000306726 RFLNAQ6ZTI6 216 aa14.21□□□□□ -0.14
PTPN9-201ENST00000306726 MFSD2AQ8NA29 543 aa14.21□□□□□ -0.14
PTPN9-201ENST00000306726 ZNF583Q96ND8 569 aa14.21□□□□□ -0.14
PTPN9-201ENST00000306726 COPS8Q99627 209 aa14.21□□□□□ -0.14
PTPN9-201ENST00000306726 FAM126AQ9BYI3 521 aaPredicted RBP14.21□□□□□ -0.14
PTPN9-201ENST00000306726 IL37Q9NZH6 218 aa14.21□□□□□ -0.14
PTPN9-201ENST00000306726 SCAMP1O15126 338 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 TBL1XO60907 577 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 SNX4O95219 450 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 OTCP00480 354 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 STSP08842 583 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 ATXN1LP0C7T5 689 aaKnown RBP14.2□□□□□ -0.14
PTPN9-201ENST00000306726 DCKP27707 260 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 SCNN1AP37088 669 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 VARS2Q5ST30 1063 aaKnown RBP14.2□□□□□ -0.14
PTPN9-201ENST00000306726 GHDCQ8N2G8 530 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 STK40Q8N2I9 435 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 TSGA13Q96PP4 275 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 ALPK1Q96QP1 1244 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 CNPPD1Q9BV87 410 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 C11orf16Q9NQ32 467 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 PAK1IP1Q9NWT1 392 aaPredicted RBP14.2□□□□□ -0.14
PTPN9-201ENST00000306726 GPR83Q9NYM4 423 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 CYP11A1P05108 521 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 MAGEA8P43361 318 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 DBPQ10586 325 aaPredicted RBP14.2□□□□□ -0.14
PTPN9-201ENST00000306726 TMEM132CQ8N3T6 1108 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 VANGL1Q8TAA9 524 aaPredicted RBP14.2□□□□□ -0.14
PTPN9-201ENST00000306726 AUTS2Q8WXX7 1259 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 BTN2A3PQ96KV6 586 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 GFM1Q96RP9 751 aaKnown RBP14.2□□□□□ -0.14
PTPN9-201ENST00000306726 OR51E2Q9H255 320 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 ACSL6Q9UKU0 697 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 RAB23Q9ULC3 237 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 A0A0G2JN53 185 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 ENO2P09104 434 aaPredicted RBP14.2□□□□□ -0.14
PTPN9-201ENST00000306726 SSTR4P31391 388 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 TGM4P49221 684 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 SLC11A2P49281 568 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 EEFSECP57772 596 aaKnown RBP14.2□□□□□ -0.14
PTPN9-201ENST00000306726 IFITM3Q01628 133 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 SPIBQ01892 262 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 MVKQ03426 396 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 CDK5R2Q13319 367 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 TUSC3Q13454 348 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 USP39Q53GS9 565 aaKnown RBP14.2□□□□□ -0.14
PTPN9-201ENST00000306726 SPANXN2Q5MJ10 180 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 LKAAEAR1Q8TD35 194 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 TMEM175Q9BSA9 504 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 TTPALQ9BTX7 342 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 ADGRE3Q9BY15 652 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 VNN3Q9NY84 501 aa14.2□□□□□ -0.14
PTPN9-201ENST00000306726 LOC110117498-PIK3R3F6TDL0 507 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 FPGTO14772 594 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 IDH3BO43837 385 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 B4GALT3O60512 393 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 MMP2P08253 660 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 ENGP17813 658 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 XPAP23025 273 aaPredicted RBP14.19□□□□□ -0.14
PTPN9-201ENST00000306726 GADD45AP24522 165 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 CORO1AP31146 461 aaKnown RBP14.19□□□□□ -0.14
PTPN9-201ENST00000306726 TTPAP49638 278 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 AIF1P55008 147 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 MEF2AQ02078 507 aaPredicted RBP14.19□□□□□ -0.14
PTPN9-201ENST00000306726 CLCA4Q14CN2 919 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 RFX4Q33E94 735 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 DEPDC1Q5TB30 811 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 CELF2-AS1Q8N7Q2 184 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 SH3KBP1Q96B97 665 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 RNF38Q9H0F5 515 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 TRPV5Q9NQA5 729 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 SNTG1Q9NSN8 517 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 GNPTGQ9UJJ9 305 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 SNX6Q9UNH7 406 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 H3BM21 787 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 SSX4O60224 188 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 OR1D2P34982 312 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 RPIAP49247 311 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 SGSHP51688 502 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 GP2P55259 537 aaKnown RBP14.19□□□□□ -0.14
PTPN9-201ENST00000306726 NFKB2Q00653 900 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 IRF8Q02556 426 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 CARD16Q5EG05 197 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.19□□□□□ -0.14
PTPN9-201ENST00000306726 DEFB128Q7Z7B8 93 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 CNTN4Q8IWV2 1026 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 ASB2Q96Q27 587 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 ZNF347Q96SE7 839 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 APOL4Q9BPW4 351 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 AASDHPPTQ9NRN7 309 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 RAD18Q9NS91 495 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 CLEC4AQ9UMR7 237 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 PCDHGA3Q9Y5H0 932 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 LCHNA4D1U4 455 aa14.19□□□□□ -0.14
PTPN9-201ENST00000306726 RFXAPO00287 272 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms