RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 IL33O95760 270 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 FCER2P06734 321 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 CD36P16671 472 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 CRYBB1P53674 252 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 RPL7AP62424 266 aaKnown RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 BNIP3Q12983 259 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 PAOXQ6QHF9 649 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 SLC26A9Q7LBE3 791 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 SLC29A4Q7RTT9 530 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF550Q7Z398 422 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 ILDR1Q86SU0 546 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 OR6N1Q8NGY5 312 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 OR5K1Q8NHB7 308 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 TBC1D15Q8TC07 691 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 ROPN1LQ96C74 230 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 HSPA12BQ96MM6 686 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 NELFAQ9H3P2 528 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 DHX33Q9H6R0 707 aaKnown RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 TNFRSF10DQ9UBN6 386 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 KCNS2Q9ULS6 477 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 CDC14AQ9UNH5 594 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 SLIT1O75093 1534 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 SPARCP09486 303 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF35P13682 527 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 LAG3P18627 525 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 GSTM2P28161 218 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 MAGEA6P43360 314 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 MARCKSL1P49006 195 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 TUSC3Q13454 348 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 LRRC66Q68CR7 880 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 PDE12Q6L8Q7 609 aaKnown RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 FAM71AQ8IYT1 594 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 LNX1Q8TBB1 728 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 CPT1CQ8TCG5 803 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF431Q8TF32 576 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 THEM6Q8WUY1 208 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 TMEM41AQ96HV5 264 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 KLRF1Q9NZS2 232 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 CFL2Q9Y281 166 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 CYP3A7-CYP3A51PA0A087WV96 503 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 CCDC85CA6NKD9 419 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 RAB36O95755 333 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 C8GP07360 202 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 PCSK2P16519 638 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 CYP3A7P24462 503 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 NOMO3P69849 1222 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 ECH1Q13011 328 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 ADAM15Q13444 863 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 ASTE1Q2TB18 679 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 UAP1L1Q3KQV9 507 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 SERPINA9Q86WD7 417 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 LAS2Q8IYD9 372 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 TMEM156Q8N614 296 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 GALNT6Q8NCL4 622 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 DGAT2Q96PD7 388 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 OR5B12Q96R08 314 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 TREX2Q9BQ50 279 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 ARHGAP9Q9BRR9 750 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 DUSP26Q9BV47 211 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 DUS2Q9NX74 493 aaKnown RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 SIRPGQ9P1W8 387 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 BORCS7-ASMTA0A0B4J1R7 106 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 A0A1B0GVI7 797 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 C2orf92A0A1B0GVN3 265 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 ARL6IP5O75915 188 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 THEGLP0DJG4 465 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 ANXA8P13928 327 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 PSMA6P60900 246 aaKnown RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 RPS14P62263 151 aaKnown RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 SLC3A1Q07837 685 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 SCARB2Q14108 478 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 GPR68Q15743 365 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 NXPE1Q8N323 547 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 SLC37A3Q8NCC5 494 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 OR10G2Q8NGC3 310 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 AP1M2Q9Y6Q5 423 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 IFT172Q9UG01 1749 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 TRIM64CA6NLI5 447 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 IFNA10P01566 189 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 HRGP04196 525 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 MYCLP1P12525 358 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 RBMXP38159 391 aaKnown RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 ATXN7L3Q14CW9 347 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-201ENST00000302528 CLNKQ7Z7G1 428 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 FBXL16Q8N461 479 aa10.17□□□□□ -0.78
CLIP1-201ENST00000302528 CFIP05156 583 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 TACR2P21452 398 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 LUMP51884 338 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-201ENST00000302528 TAS2R40P59535 323 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 FMO1Q01740 532 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 MLC1Q15049 377 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 ARL13AQ5H913 290 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-201ENST00000302528 VWA5B1Q5TIE3 1220 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 ABHD13Q7L211 337 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 MREGQ8N565 214 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 TMEM203Q969S6 136 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 TMED9Q9BVK6 235 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 RAB11FIP5Q9BXF6 653 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 DNAJB9Q9UBS3 223 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 EIF2B4Q9UI10 523 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms