RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 PIWIL4Q7Z3Z4 852 aaKnown RBP10.81□□□□□ -0.68
CLCC1-201ENST00000302500 TMEM126BQ8IUX1 230 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 CPNE9Q8IYJ1 553 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 SYTL1Q8IYJ3 562 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 DTWD1Q8N5C7 304 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 OR9A1PQ8NGU1 263 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 CFAP61Q8NHU2 1237 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 CALML6Q8TD86 181 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 SNF8Q96H20 258 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 KRT12Q99456 494 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 NDNQ99608 321 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 ERP44Q9BS26 406 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 RAB11FIP5Q9BXF6 653 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 NLNQ9BYT8 704 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 ADNPQ9H2P0 1102 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 ACTR5Q9H9F9 607 aaPredicted RBP10.81□□□□□ -0.68
CLCC1-201ENST00000302500 EURLQ9NYK6 297 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 KCND3Q9UK17 655 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 CHMP2BQ9UQN3 213 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 B8ZZF3 427 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 ZSCAN9O15535 394 aaPredicted RBP10.8□□□□□ -0.68
CLCC1-201ENST00000302500 CEACAM4O75871 244 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 PDGFAP04085 211 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 PRKAR1AP10644 381 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 ENO3P13929 434 aaPredicted RBP10.8□□□□□ -0.68
CLCC1-201ENST00000302500 PLA2G2AP14555 144 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 CHRM3P20309 590 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 FOXL2P58012 376 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 GUCY2DQ02846 1103 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 RELAQ04206 551 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 PDAP1Q13442 181 aaKnown RBP10.8□□□□□ -0.68
CLCC1-201ENST00000302500 NCF4Q15080 339 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 HIF1AQ16665 826 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 PPP1R3AQ16821 1122 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 PRTGQ2VWP7 1150 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 PTCHD3Q3KNS1 767 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 BBS9Q3SYG4 887 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 FIGLAQ6QHK4 219 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 PAQR3Q6TCH7 311 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 SYVN1Q86TM6 617 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 TAX1BP1Q86VP1 789 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 PAQR7Q86WK9 346 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 EEF1AKMT1Q8WVE0 214 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 INPP5DQ92835 1189 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 USP9XQ93008 2570 aaPredicted RBP10.8□□□□□ -0.68
CLCC1-201ENST00000302500 ZUFSPQ96AP4 578 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 SLC22A18Q96BI1 424 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 DPH2Q9BQC3 489 aaPredicted RBP10.8□□□□□ -0.68
CLCC1-201ENST00000302500 TRIM55Q9BYV6 548 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 PHACTR1Q9C0D0 580 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 WHRNQ9P202 907 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 TCFL5Q9UL49 500 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 PLCL2Q9UPR0 1127 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 SH2B3Q9UQQ2 575 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 SNX24Q9Y343 169 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 SHANK1Q9Y566 2161 aa10.8□□□□□ -0.68
CLCC1-201ENST00000302500 SETXQ7Z333 2677 aaKnown RBP10.79□□□□□ -0.68
CLCC1-201ENST00000302500 LOC105369274A0A096LPK9 316 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 LOC102723532A0A0G2JNH3 316 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 FAM187AA6NFU0 413 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 ISM1B1AKI9 464 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 E7EQ34 232 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 UMODP07911 640 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 MCM3P25205 808 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 EFNA3P52797 238 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 PMS2P54278 862 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 GPX6P59796 221 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 THOC5Q13769 683 aaKnown RBP10.79□□□□□ -0.68
CLCC1-201ENST00000302500 PHKG1Q16816 387 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 TAF1BQ53T94 588 aaPredicted RBP10.79□□□□□ -0.68
CLCC1-201ENST00000302500 HP1BP3Q5SSJ5 553 aaPredicted RBP10.79□□□□□ -0.68
CLCC1-201ENST00000302500 SBSNQ6UWP8 590 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 SYT10Q6XYQ8 523 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 CYS1Q717R9 158 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 ZC3HC1Q86WB0 502 aaKnown RBP10.79□□□□□ -0.68
CLCC1-201ENST00000302500 MCATQ8IVS2 390 aaKnown RBP10.79□□□□□ -0.68
CLCC1-201ENST00000302500 OR4N4Q8N0Y3 316 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 SHISA5Q8N114 240 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 PDIK1LQ8N165 341 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 ENDOVQ8N8Q3 282 aaKnown RBP10.79□□□□□ -0.68
CLCC1-201ENST00000302500 ZSCAN1Q8NBB4 408 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 PROKR1Q8TCW9 393 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 KIAA1143Q96AT1 154 aaPredicted RBP10.79□□□□□ -0.68
CLCC1-201ENST00000302500 PDLIM5Q96HC4 596 aaKnown RBP10.79□□□□□ -0.68
CLCC1-201ENST00000302500 C10orf90Q96M02 699 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 OR2A5Q96R48 311 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 SPSB2Q99619 263 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 SLC26A1Q9H2B4 701 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 ZDHHC18Q9NUE0 388 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 DHCR7Q9UBM7 475 aaKnown RBP10.79□□□□□ -0.68
CLCC1-201ENST00000302500 ZC3H7BQ9UGR2 993 aaKnown RBP10.79□□□□□ -0.68
CLCC1-201ENST00000302500 PDE10AQ9Y233 779 aa10.79□□□□□ -0.68
CLCC1-201ENST00000302500 FARSAQ9Y285 508 aaKnown RBP10.79□□□□□ -0.68
CLCC1-201ENST00000302500 NBPF19A0A087WUL8 3843 aa10.78□□□□□ -0.68
CLCC1-201ENST00000302500 IGLV3-12A0A075B6K2 115 aa10.78□□□□□ -0.68
CLCC1-201ENST00000302500 EFCAB8A8MWE9 144 aa10.78□□□□□ -0.68
CLCC1-201ENST00000302500 CXorf49A8MYA2 514 aaPredicted RBP10.78□□□□□ -0.68
CLCC1-201ENST00000302500 SUV39H1O43463 412 aa10.78□□□□□ -0.68
CLCC1-201ENST00000302500 OR2B3O76000 313 aa10.78□□□□□ -0.68
CLCC1-201ENST00000302500 CCNYL3P0C7X3 344 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms