RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CPNE3O75131 537 aaKnown RBP14.29□□□□□ -0.12
COL6A2-201ENST00000300527 OPN1SWP03999 348 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 HOXB8P17481 243 aaPredicted RBP14.29□□□□□ -0.12
COL6A2-201ENST00000300527 GRK4P32298 578 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 CA5AP35218 305 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 SLC19A1P41440 591 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 TWF1Q12792 350 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 NPRL3Q12980 569 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 ZNF517Q6ZMY9 492 aaPredicted RBP14.29□□□□□ -0.12
COL6A2-201ENST00000300527 ZNF598Q86UK7 904 aaKnown RBP14.29□□□□□ -0.12
COL6A2-201ENST00000300527 LACC1Q8IV20 430 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 CACTIN-AS1Q8N1I8 211 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 OR7G1Q8NGA0 311 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 HSH2DQ96JZ2 352 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 FYTTD1Q96QD9 318 aaKnown RBP14.29□□□□□ -0.12
COL6A2-201ENST00000300527 CNPPD1Q9BV87 410 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 FBXL12Q9NXK8 326 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 FAM8A1Q9UBU6 413 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 RAPGEFL1Q9UHV5 662 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 DLGAP4Q9Y2H0 992 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 LOC285095A0A1B0GVY8 99 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 FAM172BPA6NC97 362 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 FFAR2O15552 330 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 WBP4O75554 376 aaKnown RBP14.29□□□□□ -0.12
COL6A2-201ENST00000300527 ITGAMP11215 1152 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 SUOXP51687 545 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 CAMK2GQ13555 558 aaPredicted RBP14.29□□□□□ -0.12
COL6A2-201ENST00000300527 DDX39BQ13838 428 aaKnown RBP14.29□□□□□ -0.12
COL6A2-201ENST00000300527 LRRC26Q2I0M4 334 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 ZMAT1Q5H9K5 638 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 LIMS2Q7Z4I7 341 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 ENTHD1Q8IYW4 607 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 MDGA1Q8NFP4 955 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 MYEOVQ96EZ4 313 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 CCDC115Q96NT0 180 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 SERPINB11Q96P15 392 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 YME1L1Q96TA2 773 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 PHOX2BQ99453 314 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 AASDHPPTQ9NRN7 309 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 IMPAD1Q9NX62 359 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 NUFIP1Q9UHK0 495 aaKnown RBP14.29□□□□□ -0.12
COL6A2-201ENST00000300527 KCNH4Q9UQ05 1017 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 PNMA8CA0A1B0GUJ8 204 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 LOC730098B7Z3J9 87 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 KIAA0513O60268 411 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 PTHP01270 115 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 ITGB1P05556 798 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 RHOQP17081 205 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 PRKCAP17252 672 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 TACR1P25103 407 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 SOX6P35712 828 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 TGM4P49221 684 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 FXNQ16595 210 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 LYPD8Q6UX82 237 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 RFPL4BQ6ZWI9 263 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 CYP4Z2PQ8N1L4 340 aa14.29□□□□□ -0.12
COL6A2-201ENST00000300527 H3BM21 787 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 TSPAN12O95859 305 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 SNAI1O95863 264 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-201ENST00000300527 FHP07954 510 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 BCKDHAP12694 445 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 CTPS1P17812 591 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 DNAJA1P31689 397 aaKnown RBP14.28□□□□□ -0.12
COL6A2-201ENST00000300527 ELP6Q0PNE2 266 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 E2F2Q14209 437 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 TSTQ16762 297 aaKnown RBP14.28□□□□□ -0.12
COL6A2-201ENST00000300527 CTSL3PQ5NE16 218 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 RNF175Q8N4F7 328 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 OR6F1Q8NGZ6 308 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 SUN5Q8TC36 379 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 APOLD1Q96LR9 279 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 CINPQ9BW66 212 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-201ENST00000300527 PCDHGB1Q9Y5G3 927 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 ARL5CA6NH57 179 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 ZSCAN5BA6NJL1 495 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 TSC22D2O75157 780 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 HOXA9P31269 272 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 UBE3AQ05086 875 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 SLAMF1Q13291 335 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 RAB43Q86YS6 212 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 BEND7Q8N7W2 519 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-201ENST00000300527 VANGL1Q8TAA9 524 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-201ENST00000300527 PANX1Q96RD7 426 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 RANGRFQ9HD47 186 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-201ENST00000300527 CCDC177Q9NQR7 707 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-201ENST00000300527 DUSP12Q9UNI6 340 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 DOCK1Q14185 1865 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 PARP14Q460N5 1801 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 MEN1O00255 615 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 IL6P05231 212 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 JUNDP17535 347 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 FPR1P21462 350 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 TUBA1BP68363 451 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 SEMG2Q02383 582 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 USP39Q53GS9 565 aaKnown RBP14.28□□□□□ -0.12
COL6A2-201ENST00000300527 CAPN13Q6MZZ7 669 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-201ENST00000300527 TUBA1AQ71U36 451 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 UMODL1-AS1Q8N2C9 162 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 BCL7BQ9BQE9 202 aa14.28□□□□□ -0.12
COL6A2-201ENST00000300527 POPDC3Q9HBV1 291 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms