RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 RBM20Q5T481 1227 aaKnown RBP17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 KLHL24Q6TFL4 600 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 C1orf52Q8N6N3 182 aaKnown RBP17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 OR10A6Q8NH74 314 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 LPGAT1Q92604 370 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 KIAA1191Q96A73 305 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 IL1RAPQ9NPH3 570 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 ZNF358Q9NW07 568 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 IFT80Q9P2H3 777 aaPredicted RBP17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 UBR2Q8IWV8 1755 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 COQ9O75208 318 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 ITGB1P05556 798 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 EFNA1P20827 205 aaPredicted RBP17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 DRD1P21728 446 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 TCEA1P23193 301 aaKnown RBP17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 ATP12AP54707 1039 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 CLDN10P78369 228 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 HMGCS1Q01581 520 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 EMC10Q5UCC4 262 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 TMEM156Q8N614 296 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 REXO4Q9GZR2 422 aaKnown RBP17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 GALPQ9UBC7 116 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 KLF15Q9UIH9 416 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 SCML1Q9UN30 329 aa17.28■□□□□ 0.36
CDC42EP3-201ENST00000295324 C2orf74A8MZ97 194 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 SLC22A2O15244 555 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 LILRB3O75022 631 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 UGT2B11O75310 529 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 ALPPP05187 535 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 PREPP48147 710 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 CDK9P50750 372 aaKnown RBP17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 TBC1D25Q3MII6 688 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 IFI44LQ53G44 452 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 CXXC5Q7LFL8 322 aaKnown RBP17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 PIM3Q86V86 326 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 TMEM25Q86YD3 366 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 ZNF527Q8NB42 609 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 SERINC1Q9NRX5 453 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 KAT6AQ92794 2004 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 MRPL43Q8N983 215 aaKnown RBP17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 RBM15BQ8NDT2 890 aaKnown RBP17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 ARHGAP9Q9BRR9 750 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 HAPLN2Q9GZV7 340 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 SPATA7Q9P0W8 599 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 TMED5Q9Y3A6 229 aa17.27■□□□□ 0.36
CDC42EP3-201ENST00000295324 MAGEB3O15480 346 aa17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 MYL9P24844 172 aa17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 MSX2P35548 267 aaPredicted RBP17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 SNAPC1Q16533 368 aa17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 TNFAIP8L2Q6P589 184 aaPredicted RBP17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 LRRTM3Q86VH5 581 aa17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 SMPDL3BQ92485 455 aa17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 POPDC3Q9HBV1 291 aa17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 TMLHEQ9NVH6 421 aa17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 CXorf49A8MYA2 514 aaPredicted RBP17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 GPIP06744 558 aa17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 TMEM126BQ8IUX1 230 aa17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 PQLC1Q8N2U9 271 aa17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 PLA2G15Q8NCC3 412 aa17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 STRA6Q9BX79 667 aa17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 IKZF2Q9UKS7 526 aa17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 TRPM3Q9HCF6 1732 aaPredicted RBP17.27■□□□□ 0.35
CDC42EP3-201ENST00000295324 GSC2O15499 205 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 TIPRLO75663 272 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 ECDO95905 644 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 GALNT7Q86SF2 657 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 STON1Q9Y6Q2 735 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 KLK1P06870 262 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 POLR2CP19387 275 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 KIAA1161Q6NSJ0 714 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 C2CD4AQ8NCU7 369 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 ZNF624Q9P2J8 865 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 CHRNGP07510 517 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 PLGLB1Q02325 96 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 MARCH8Q5T0T0 291 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 ASNA1O43681 348 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 ITGBL1O95965 494 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 EBLN1P0CF75 366 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 JUNDP17535 347 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 HRH2P25021 359 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 RCVRNP35243 200 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 CHN2P52757 468 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 ATP1A4Q13733 1029 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 SGCBQ16585 318 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 SORCS1Q8WY21 1168 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 SIGLEC10Q96LC7 697 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 MCCC2Q9HCC0 563 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 CYP4B1P13584 511 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 SLC7A1P30825 629 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 OLIG2Q13516 323 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 ZNF598Q86UK7 904 aaKnown RBP17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 HPS6Q86YV9 775 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 AMER2Q8N7J2 671 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 RBM4BQ9BQ04 359 aaKnown RBP17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 RBM4Q9BWF3 364 aaKnown RBP17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 CLEC4MQ9H2X3 399 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 CDH22Q9UJ99 828 aa17.26■□□□□ 0.35
CDC42EP3-201ENST00000295324 C5P01031 1676 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 LOC730098B7Z3J9 87 aa17.25■□□□□ 0.35
CDC42EP3-201ENST00000295324 SYPP08247 313 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms