RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 MARCH9Q86YJ5 346 aa14.99□□□□□ -0.01
SHROOM4-201ENST00000289292 FBXO27Q8NI29 283 aa14.99□□□□□ -0.01
SHROOM4-201ENST00000289292 UPF1Q92900 1129 aaKnown RBP eCLIP14.99□□□□□ -0.01
SHROOM4-201ENST00000289292 GPER1Q99527 375 aa14.99□□□□□ -0.01
SHROOM4-201ENST00000289292 RNF208Q9H0X6 261 aa14.99□□□□□ -0.01
SHROOM4-201ENST00000289292 TBC1D3DA0A087WVF3 549 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 TBC1D3IA0A087WXS9 549 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 TBC1D3EA0A087X179 549 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 TBC1D3KA0A087X1G2 549 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 TBC1D3FA6NER0 549 aaPredicted RBP14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 TBC1D3LB9A6J9 549 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 BCHEP06276 602 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 TBC1D3HP0C7X1 549 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 MLLT10P55197 1068 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 TBC1D3GQ6DHY5 549 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 TBC1D3CQ6IPX1 549 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 TMEM53Q6P2H8 277 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 PSRC1Q6PGN9 363 aaPredicted RBP14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 FAM92BQ6ZTR7 304 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 TBC1D3Q8IZP1 549 aaPredicted RBP14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 TIFAQ96CG3 184 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 CDKN2AIPNLQ96HQ2 116 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 ZNF69Q9UC07 566 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 RUVBL1Q9Y265 456 aaKnown RBP14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 DAPL1A0PJW8 107 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 ISPDA4D126 451 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 DNTTP04053 509 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 NCBP2P52298 156 aaKnown RBP eCLIP14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 SMCO1Q147U7 214 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 AQP11Q8NBQ7 271 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 KCNN2Q9H2S1 579 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 HS3ST4Q9Y661 456 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 WWP2O00308 870 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 GRB7Q14451 532 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 RAB6CQ53S08 254 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 ADNP2Q6IQ32 1131 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 LYSMD3Q7Z3D4 306 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 SLC35F5Q8WV83 523 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 HERC2P3Q9BVR0 1158 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 RAB6CQ9H0N0 254 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 TRPS1Q9UHF7 1281 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 SLC22A14Q9Y267 594 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 SLC27A6Q9Y2P4 619 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 ARFGEF2Q9Y6D5 1785 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 MATN4O95460 622 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 BDKRB1P46663 353 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 FBXL18Q96ME1 805 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 HAPLN3Q96S86 360 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 ZIM2Q9NZV7 527 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 CKLFQ9UBR5 152 aa14.98□□□□□ -0.01
SHROOM4-201ENST00000289292 A0A1W2PRB8 838 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 ALDOAP04075 364 aaKnown RBP14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 CSF2P04141 144 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 HEPACAMQ14CZ8 416 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 RFTN2Q52LD8 501 aaPredicted RBP14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 SPANXN4Q5MJ08 99 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 OSTM1Q86WC4 334 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 ZNF557Q8N988 423 aaPredicted RBP14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 ZNF248Q8NDW4 579 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 RASSF5Q8WWW0 418 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 KCTD7Q96MP8 289 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 DPP7Q9UHL4 492 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 GRIP1Q9Y3R0 1128 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 A0A0X1KG70 313 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 BTBD19C9JJ37 291 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 CRB2Q5IJ48 1285 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 DTX3Q8N9I9 347 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 KCT2Q8NC54 265 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 RNF6Q9Y252 685 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 RPL36Q9Y3U8 105 aaKnown RBP14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 RGPD8O14715 1765 aaPredicted RBP14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 GLDCP23378 1020 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 DIO3P55073 304 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 MYBPC3Q14896 1274 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 ZC3H3Q8IXZ2 948 aaKnown RBP14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 GRHL3Q8TE85 626 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 BEX2Q9BXY8 128 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 TLR6Q9Y2C9 796 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 LRRC72A6NJI9 287 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 HAS3O00219 553 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 PLOD2O00469 737 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 PITPNM1O00562 1244 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 NRP1O14786 923 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 KLK1P06870 262 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 SLC15A1P46059 708 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 OR1E2P47887 323 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 NEK7Q8TDX7 302 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 WACQ9BTA9 647 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 C14orf119Q9NWQ9 140 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 THUMPD1Q9NXG2 353 aaKnown RBP14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 ZNF510Q9Y2H8 683 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 CPQQ9Y646 472 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 OR14I1A6ND48 311 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 FBP2O00757 339 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 ZNF806P0C7X5 589 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 NSG1P42857 185 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 DNASE1L1P49184 302 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 NKX2-5P52952 324 aaPredicted RBP14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 BTBD16Q32M84 506 aa14.97□□□□□ -0.01
SHROOM4-201ENST00000289292 FUT10Q6P4F1 479 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms