RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 LPOP22079 712 aaPredicted RBP18.18■□□□□ 0.5
SSC4D-201ENST00000275560 CTSKP43235 329 aa18.18■□□□□ 0.5
SSC4D-201ENST00000275560 TTPAP49638 278 aa18.18■□□□□ 0.5
SSC4D-201ENST00000275560 ARHGDIAP52565 204 aa18.18■□□□□ 0.5
SSC4D-201ENST00000275560 USP39Q53GS9 565 aaKnown RBP18.18■□□□□ 0.5
SSC4D-201ENST00000275560 KCNJ9Q92806 393 aa18.18■□□□□ 0.5
SSC4D-201ENST00000275560 IL1RAPQ9NPH3 570 aa18.18■□□□□ 0.5
SSC4D-201ENST00000275560 FBXL12Q9NXK8 326 aa18.18■□□□□ 0.5
SSC4D-201ENST00000275560 LINC00854A0A1B0GVQ3 168 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 GOLGA8CPA6NN73 597 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 STX7O15400 261 aaKnown RBP18.17■□□□□ 0.5
SSC4D-201ENST00000275560 IDH3BO43837 385 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 PTPN6P29350 595 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 CXCR4P61073 352 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 ZXDBP98169 803 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 NPRL3Q12980 569 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 RNF175Q8N4F7 328 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 IL17RDQ8NFM7 739 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 LILRB4Q8NHJ6 448 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 TPD52L3Q96J77 140 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 CINPQ9BW66 212 aaPredicted RBP18.17■□□□□ 0.5
SSC4D-201ENST00000275560 CIPCQ9C0C6 399 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 DDX28Q9NUL7 540 aaKnown RBP18.17■□□□□ 0.5
SSC4D-201ENST00000275560 MARCH2Q9P0N8 246 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 UGT2A1Q9Y4X1 527 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 OR4F3Q6IEY1 312 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 PDE12Q6L8Q7 609 aaKnown RBP18.17■□□□□ 0.5
SSC4D-201ENST00000275560 TSPYL5Q86VY4 417 aaPredicted RBP18.17■□□□□ 0.5
SSC4D-201ENST00000275560 ATAD1Q8NBU5 361 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 OR52E4Q8NGH9 312 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 SIGLEC11Q96RL6 698 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 KCNS3Q9BQ31 491 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 ROGDIQ9GZN7 287 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 WWOXQ9NZC7 414 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 FLRT1Q9NZU1 646 aa18.17■□□□□ 0.5
SSC4D-201ENST00000275560 CYP7B1O75881 506 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 COL6A1P12109 1028 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 AQP1P29972 269 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 DNAJA1P31689 397 aaKnown RBP18.16■□□□□ 0.5
SSC4D-201ENST00000275560 S100A3P33764 101 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 ZNF598Q86UK7 904 aaKnown RBP18.16■□□□□ 0.5
SSC4D-201ENST00000275560 HSH2DQ96JZ2 352 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 TTPALQ9BTX7 342 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 ACPTQ9BZG2 426 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 CEP44Q9C0F1 390 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 RNF38Q9H0F5 515 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 PARVBQ9HBI1 364 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 TM9SF3Q9HD45 589 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 AASDHPPTQ9NRN7 309 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 THUMPD1Q9NXG2 353 aaKnown RBP18.16■□□□□ 0.5
SSC4D-201ENST00000275560 GPR83Q9NYM4 423 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 ARIH1Q9Y4X5 557 aaPredicted RBP18.16■□□□□ 0.5
SSC4D-201ENST00000275560 PCDHGA6Q9Y5G7 932 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 PLXNA4Q9HCM2 1894 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 HAS3O00219 553 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 TAF4O00268 1085 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 HAT1O14929 419 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 HOXC11O43248 304 aaPredicted RBP18.16■□□□□ 0.5
SSC4D-201ENST00000275560 FABP3P05413 133 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 CXCR2P25025 360 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 MRPS6P82932 125 aaKnown RBP18.16■□□□□ 0.5
SSC4D-201ENST00000275560 CAMK2GQ13555 558 aaPredicted RBP18.16■□□□□ 0.5
SSC4D-201ENST00000275560 NDUFA5Q16718 116 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 ZNF467Q7Z7K2 595 aaPredicted RBP18.16■□□□□ 0.5
SSC4D-201ENST00000275560 P3H2Q8IVL5 708 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 TCAIMQ8N3R3 496 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 NEDD4LQ96PU5 975 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 MGME1Q9BQP7 344 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 GABARAPL1Q9H0R8 117 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 RAD18Q9NS91 495 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 TMEM184CQ9NVA4 438 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 TBC1D14Q9P2M4 693 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 SCML2Q9UQR0 700 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 PCDHGB6Q9Y5F9 930 aa18.16■□□□□ 0.5
SSC4D-201ENST00000275560 KRT87PA6NCN2 255 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 M0QZQ0 153 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 MANBAO00462 879 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 INSIG1O15503 277 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 PTTG1O95997 202 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 KRT8P05787 483 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 STSP08842 583 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 S100A5P33763 92 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 RPS24P62847 133 aaKnown RBP18.15■□□□□ 0.5
SSC4D-201ENST00000275560 PROX2Q3B8N5 592 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 ATAD3CQ5T2N8 411 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 PNCKQ6P2M8 343 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 LINGO4Q6UY18 593 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 TMEM132CQ8N3T6 1108 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 ULK4Q96C45 1275 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 CDK5RAP1Q96SZ6 601 aaKnown RBP18.15■□□□□ 0.5
SSC4D-201ENST00000275560 CCSER2Q9H7U1 834 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 EHD3Q9NZN3 535 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 TNPO3Q9Y5L0 923 aaKnown RBP18.15■□□□□ 0.5
SSC4D-201ENST00000275560 RAI2Q9Y5P3 530 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 PRSS21Q9Y6M0 314 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 SAGE2PA6NJ88 616 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 DRGXA6NNA5 263 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 CTDSP2O14595 271 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 CTPS1P17812 591 aa18.15■□□□□ 0.5
SSC4D-201ENST00000275560 FPR1P21462 350 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms