RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 MAGEC3Q8TD91 643 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 HMGB4Q8WW32 186 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 SPNS1Q9H2V7 528 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 ITM2CQ9NQX7 267 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 ASF1AQ9Y294 204 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 DLGAP4Q9Y2H0 992 aa11.74□□□□□ -0.53
SDE2-201ENST00000272091 PCM1Q15154 2024 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 H0Y3Z8 333 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 GNAZP19086 355 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 MSX2P35548 267 aaPredicted RBP11.73□□□□□ -0.53
SDE2-201ENST00000272091 CASP2P42575 452 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 POLR2JP52435 117 aaKnown RBP11.73□□□□□ -0.53
SDE2-201ENST00000272091 MS4A2Q01362 244 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 IRF8Q02556 426 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 PTGR1Q14914 329 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 FRG2Q64ET8 278 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 SPDL1Q96EA4 605 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 FRG2BQ96QU4 278 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 TIMM29Q9BSF4 260 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 SNX6Q9UNH7 406 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 DUSP12Q9UNI6 340 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 KCNK6Q9Y257 313 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 NEUROG3Q9Y4Z2 214 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 MAP3K7O43318 606 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 GNPDA1P46926 289 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 MMEL1Q495T6 779 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 GCNT7Q6ZNI0 430 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 SYTL1Q8IYJ3 562 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 WDR34Q96EX3 536 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 APIPQ96GX9 242 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 INSM2Q96T92 566 aaPredicted RBP11.73□□□□□ -0.53
SDE2-201ENST00000272091 CA14Q9ULX7 337 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 FAM234BA2RU67 622 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 EEDO75530 441 aaKnown RBP11.73□□□□□ -0.53
SDE2-201ENST00000272091 CIB2O75838 187 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 ETHE1O95571 254 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 CLCNKAP51800 687 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 PTCRAQ6ISU1 281 aaPredicted RBP11.73□□□□□ -0.53
SDE2-201ENST00000272091 LIX1Q8N485 282 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 FAM156AQ8NDB6 213 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 OR2T34Q8NGX1 318 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 FCRL1Q96LA6 429 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 C1QTNF7Q9BXJ2 289 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 ELOVL6Q9H5J4 265 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 C1orf109Q9NX04 203 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 GPRC5BQ9NZH0 403 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 TMEM181Q9P2C4 612 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 CD300AQ9UGN4 299 aa11.73□□□□□ -0.53
SDE2-201ENST00000272091 A0A1W2PP18 115 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 H0YIV9 168 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 IGLV3-19P01714 112 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 HOXC4P09017 264 aaPredicted RBP11.72□□□□□ -0.53
SDE2-201ENST00000272091 JAK1P23458 1154 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 KIAA1024LP59773 190 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 PRKG2Q13237 762 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 CLCA4Q14CN2 919 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 RPS6KA2Q15349 733 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 DCUN1D3Q8IWE4 304 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 C2orf73Q8N5S3 287 aaPredicted RBP11.72□□□□□ -0.53
SDE2-201ENST00000272091 PDXPQ96GD0 296 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 RMI1Q9H9A7 625 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 SPATA6Q9NWH7 488 aaPredicted RBP11.72□□□□□ -0.53
SDE2-201ENST00000272091 SLAMF8Q9P0V8 285 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 NDUFAF1Q9Y375 327 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 SEC22BO75396 215 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 IGHV4-34P06331 123 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 COQ5Q5HYK3 327 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 CAPN13Q6MZZ7 669 aaPredicted RBP11.72□□□□□ -0.53
SDE2-201ENST00000272091 TSPEARQ8WU66 669 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 OR1E3Q8WZA6 343 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 ROPN1LQ96C74 230 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 TRIM8Q9BZR9 551 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 C6orf106Q9H6K1 298 aaPredicted RBP11.72□□□□□ -0.53
SDE2-201ENST00000272091 NDE1Q9NXR1 346 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 SCHIP1Q9P0W5 487 aaPredicted RBP11.72□□□□□ -0.53
SDE2-201ENST00000272091 DNAH14Q0VDD8 3507 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 PRAMEF33A0A0G2JMD5 474 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 A0A1W2PPV9 198 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 KANSL1LA0AUZ9 987 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 PRSS38A1L453 326 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 KRBA1A5PL33 1030 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 ACOT8O14734 319 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 BCKDHAP12694 445 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 RCN1Q15293 331 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 TIGD2Q4W5G0 525 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 HABP4Q5JVS0 413 aaKnown RBP11.72□□□□□ -0.53
SDE2-201ENST00000272091 RNF111Q6ZNA4 994 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 KRTCAP2Q8N6L1 136 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 FRMD1Q8N878 549 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 DENND6BQ8NEG7 585 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 C11orf24Q96F05 449 aaPredicted RBP11.72□□□□□ -0.53
SDE2-201ENST00000272091 TMEM45AQ9NWC5 275 aa11.72□□□□□ -0.53
SDE2-201ENST00000272091 TDRKHQ9Y2W6 561 aaKnown RBP11.72□□□□□ -0.53
SDE2-201ENST00000272091 PRORSD1PA6NEY8 169 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 CLGNO14967 610 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 AMD1P17707 334 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 TACR1P25103 407 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 CAPRIN1Q14444 709 aaKnown RBP11.71□□□□□ -0.53
SDE2-201ENST00000272091 IMPG1Q17R60 797 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 TMPRSS11BQ86T26 416 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms