RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 C10orf90Q96M02 699 aa8.57□□□□□ -1.04
TPM3-201ENST00000271850 FER1L6-AS2Q96M78 137 aa8.57□□□□□ -1.04
TPM3-201ENST00000271850 IP6K3Q96PC2 410 aa8.57□□□□□ -1.04
TPM3-201ENST00000271850 PANX2Q96RD6 677 aa8.57□□□□□ -1.04
TPM3-201ENST00000271850 SLC29A3Q9BZD2 475 aa8.57□□□□□ -1.04
TPM3-201ENST00000271850 TRIM5Q9C035 493 aa8.57□□□□□ -1.04
TPM3-201ENST00000271850 ILKAPQ9H0C8 392 aaPredicted RBP8.57□□□□□ -1.04
TPM3-201ENST00000271850 P2RY12Q9H244 342 aa8.57□□□□□ -1.04
TPM3-201ENST00000271850 SOX17Q9H6I2 414 aaPredicted RBP8.57□□□□□ -1.04
TPM3-201ENST00000271850 NDOR1Q9UHB4 597 aa8.57□□□□□ -1.04
TPM3-201ENST00000271850 POLG2Q9UHN1 485 aa8.57□□□□□ -1.04
TPM3-201ENST00000271850 SRPK3Q9UPE1 567 aa8.57□□□□□ -1.04
TPM3-201ENST00000271850 SLC5A6Q9Y289 635 aa8.57□□□□□ -1.04
TPM3-201ENST00000271850 ZGRF1Q86YA3 2104 aa8.57□□□□□ -1.04
TPM3-201ENST00000271850 PDZD2O15018 2839 aa8.57□□□□□ -1.04
TPM3-201ENST00000271850 LOC105369274A0A096LPK9 316 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 LOC102723532A0A0G2JNH3 316 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 RASGRF2O14827 1237 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 DSCR3O14972 297 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 LIASO43766 372 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 WISP2O76076 250 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 KLHL18O94889 574 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 SLCO2B1O94956 709 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 OR56A5P0C7T3 313 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 ZSCAN5DPP0CG00 497 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 ALAS2P22557 587 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 ITGA3P26006 1051 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 GLRBP48167 497 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 ZNF75DP51815 510 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 HSPA14Q0VDF9 509 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 CDH17Q12864 832 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 AIMP2Q13155 320 aaKnown RBP8.56□□□□□ -1.04
TPM3-201ENST00000271850 FASTKQ14296 549 aaKnown RBP8.56□□□□□ -1.04
TPM3-201ENST00000271850 P3H1Q32P28 736 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 SYTL3Q4VX76 610 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 DNAJC21Q5F1R6 531 aaKnown RBP8.56□□□□□ -1.04
TPM3-201ENST00000271850 CTSL3PQ5NE16 218 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 PRAMEF13Q5VWM6 474 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 FIGLAQ6QHK4 219 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 AFTPHQ6ULP2 937 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 DCUN1D3Q8IWE4 304 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 OR4N4Q8N0Y3 316 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 ARHGEF39Q8N4T4 335 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 ST6GALNAC3Q8NDV1 305 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 CATSPER1Q8NEC5 780 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 OR11G2Q8NGC1 345 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 OR2L8Q8NGY9 312 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 OR4L1Q8NH43 312 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 PPP4R1Q8TF05 950 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 PSMF1Q92530 271 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 PPP1R2P1Q96PQ5 205 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 WDR77Q9BQA1 342 aaPredicted RBP8.56□□□□□ -1.04
TPM3-201ENST00000271850 C17orf62Q9BQA9 187 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 DESI2Q9BSY9 194 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 NDC1Q9BTX1 674 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 WDR54Q9H977 334 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 CHRAC1Q9NRG0 131 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 TREX1Q9NSU2 369 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 CUTCQ9NTM9 273 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 TXLNGQ9NUQ3 528 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 GPN3Q9UHW5 284 aaPredicted RBP8.56□□□□□ -1.04
TPM3-201ENST00000271850 RIMKLBQ9ULI2 386 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 TCAF1Q9Y4C2 921 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 KLK4Q9Y5K2 254 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 COPG1Q9Y678 874 aaKnown RBP8.56□□□□□ -1.04
TPM3-201ENST00000271850 MAU2Q9Y6X3 613 aa8.56□□□□□ -1.04
TPM3-201ENST00000271850 IGKV1-8A0A0C4DH67 115 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 HEATR9A2RTY3 570 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 QSOX1O00391 747 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 PEX12O00623 359 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 C1orf105O95561 183 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 ALBP02768 609 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 CELA2AP08217 269 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 F7P08709 466 aaPredicted RBP8.55□□□□□ -1.04
TPM3-201ENST00000271850 ADRA1DP25100 572 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 TSFMP43897 325 aaKnown RBP8.55□□□□□ -1.04
TPM3-201ENST00000271850 TDGF1P3P51864 188 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 NAP1L1P55209 391 aaKnown RBP8.55□□□□□ -1.04
TPM3-201ENST00000271850 CRADDP78560 199 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 SRSF11Q05519 484 aaKnown RBP8.55□□□□□ -1.04
TPM3-201ENST00000271850 GBX1Q14549 363 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 CYP2A13Q16696 494 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.55□□□□□ -1.04
TPM3-201ENST00000271850 LYPLAL1Q5VWZ2 237 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 ZNF324BQ6AW86 544 aaPredicted RBP8.55□□□□□ -1.04
TPM3-201ENST00000271850 UNC5DQ6UXZ4 953 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 RNF44Q7L0R7 432 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 PEX26Q7Z412 305 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 HOOK3Q86VS8 718 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 PARP9Q8IXQ6 854 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 ZADH2Q8N4Q0 377 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 OR2A1Q8NGT9 310 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 CFAP61Q8NHU2 1237 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 GRHL3Q8TE85 626 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 C1orf54Q8WWF1 131 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 N4BP2L2Q92802 583 aaPredicted RBP8.55□□□□□ -1.04
TPM3-201ENST00000271850 C8orf44Q96CB5 159 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 C5orf34Q96MH7 638 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 BIRC8Q96P09 236 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 TAAR6Q96RI8 345 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms