RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 AASDHPPTQ9NRN7 309 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 SCN10AQ9Y5Y9 1956 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 RFXANKO14593 260 aa26.76■■□□□ 1.87
CBX4-201ENST00000269397 GRK3P35626 688 aa26.76■■□□□ 1.87
CBX4-201ENST00000269397 ASB8Q9H765 288 aa26.76■■□□□ 1.87
CBX4-201ENST00000269397 NDRG4Q9ULP0 352 aaKnown RBP26.76■■□□□ 1.87
CBX4-201ENST00000269397 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.76■■□□□ 1.87
CBX4-201ENST00000269397 WBP4O75554 376 aaKnown RBP26.76■■□□□ 1.87
CBX4-201ENST00000269397 PGLSO95336 258 aa26.76■■□□□ 1.87
CBX4-201ENST00000269397 CD160O95971 181 aa26.76■■□□□ 1.87
CBX4-201ENST00000269397 C21orf33P30042 268 aaPredicted RBP26.76■■□□□ 1.87
CBX4-201ENST00000269397 MAGEA11P43364 429 aa26.76■■□□□ 1.87
CBX4-201ENST00000269397 ZNF177Q13360 481 aaPredicted RBP26.76■■□□□ 1.87
CBX4-201ENST00000269397 BCL2A1Q16548 175 aa26.76■■□□□ 1.87
CBX4-201ENST00000269397 LYSMD2Q8IV50 215 aa26.76■■□□□ 1.87
CBX4-201ENST00000269397 RNF175Q8N4F7 328 aa26.76■■□□□ 1.87
CBX4-201ENST00000269397 SAMD4AQ9UPU9 718 aaKnown RBP26.76■■□□□ 1.87
CBX4-201ENST00000269397 ATP11BQ9Y2G3 1177 aa26.76■■□□□ 1.87
CBX4-201ENST00000269397 TMED5Q9Y3A6 229 aa26.76■■□□□ 1.87
CBX4-201ENST00000269397 PCDHB1Q9Y5F3 818 aa26.76■■□□□ 1.87
CBX4-201ENST00000269397 OR2A25A4D2G3 310 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 KLKB1P03952 638 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 IRF1P10914 325 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 ZNF7P17097 686 aaPredicted RBP26.75■■□□□ 1.87
CBX4-201ENST00000269397 EFNA1P20827 205 aaPredicted RBP26.75■■□□□ 1.87
CBX4-201ENST00000269397 MVKQ03426 396 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 ABHD18Q0P651 414 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 RTN4RL1Q86UN2 441 aaPredicted RBP26.75■■□□□ 1.87
CBX4-201ENST00000269397 SVOPQ8N4V2 548 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 Q8N9G6 341 aaPredicted RBP26.75■■□□□ 1.87
CBX4-201ENST00000269397 FAM83FQ8NEG4 500 aaPredicted RBP26.75■■□□□ 1.87
CBX4-201ENST00000269397 TM9SF3Q9HD45 589 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 ITM2CQ9NQX7 267 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 FCF1Q9Y324 198 aaKnown RBP26.75■■□□□ 1.87
CBX4-201ENST00000269397 WNT9AO14904 365 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 CCNDBP1O95273 360 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 POC5Q8NA72 575 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 SELENOMQ8WWX9 145 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 DNASE1L2Q92874 299 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 GPR62Q9BZJ7 368 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 VWA8A3KMH1 1905 aa26.75■■□□□ 1.87
CBX4-201ENST00000269397 MTMR11A4FU01 709 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 DUSP11O75319 330 aaKnown RBP26.74■■□□□ 1.87
CBX4-201ENST00000269397 VNN2O95498 520 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 DLGAP3O95886 979 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 EBLN1P0CF75 366 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 DBTP11182 482 aaKnown RBP26.74■■□□□ 1.87
CBX4-201ENST00000269397 PCYT1AP49585 367 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 CLDN8P56748 225 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 RPP38P78345 283 aaKnown RBP26.74■■□□□ 1.87
CBX4-201ENST00000269397 SEMG2Q02383 582 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 DSC1Q08554 894 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 PROX1Q92786 737 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 USP7Q93009 1102 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 GABARAPL1Q9H0R8 117 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 ITGB1BP2Q9UKP3 347 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 ZNF451Q9Y4E5 1061 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 KRT87PA6NCN2 255 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 UPK1BO75841 260 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 VIPP01282 170 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 FABP3P05413 133 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 SPNP16150 400 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 PAX3P23760 479 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 GTF2E2P29084 291 aaKnown RBP26.74■■□□□ 1.87
CBX4-201ENST00000269397 DNAJA1P31689 397 aaKnown RBP26.74■■□□□ 1.87
CBX4-201ENST00000269397 SLC11A2P49281 568 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 CXCR4P61073 352 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 SF3B4Q15427 424 aaKnown RBP eCLIP26.74■■□□□ 1.875e-8■■■■□ 23.9
CBX4-201ENST00000269397 SOWAHCQ53LP3 525 aaPredicted RBP26.74■■□□□ 1.87
CBX4-201ENST00000269397 KIAA1614Q5VZ46 1190 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 STEAP3Q658P3 488 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 PRSS48Q7RTY5 328 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 ADGRG2Q8IZP9 1017 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 CARNMT1Q8N4J0 409 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 PAF1Q8N7H5 531 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 TM6SF2Q9BZW4 377 aa26.74■■□□□ 1.87
CBX4-201ENST00000269397 TRMT13Q9NUP7 481 aaKnown RBP26.74■■□□□ 1.87
CBX4-201ENST00000269397 DGKAP23743 735 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 ATAD3BQ5T9A4 648 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 GPR153Q6NV75 609 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 APH1BQ8WW43 257 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 NTMT1Q9BV86 223 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 EBPLQ9BY08 206 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 RNF167Q9H6Y7 350 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 TRPS1Q9UHF7 1281 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 GAPDHSO14556 408 aaPredicted RBP26.73■■□□□ 1.87
CBX4-201ENST00000269397 STK16O75716 305 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 IL1RNP18510 177 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 C5orf22Q49AR2 442 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 NCEH1Q6PIU2 408 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 ZBTB2Q8N680 514 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 BHMTQ93088 406 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 APIPQ96GX9 242 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 TPD52L3Q96J77 140 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 HSH2DQ96JZ2 352 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 THG1LQ9NWX6 298 aaKnown RBP26.73■■□□□ 1.87
CBX4-201ENST00000269397 MAN2B2Q9Y2E5 1009 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 AP3M1Q9Y2T2 418 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 AIREO43918 545 aa26.73■■□□□ 1.87
CBX4-201ENST00000269397 CLDN9O95484 217 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms