RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 METTL8Q9H825 291 aaKnown RBP17.6■□□□□ 0.41
COL5A3-201ENST00000264828 EIF2B3Q9NR50 452 aaKnown RBP17.6■□□□□ 0.41
COL5A3-201ENST00000264828 AJAP1Q9UKB5 411 aaPredicted RBP17.6■□□□□ 0.41
COL5A3-201ENST00000264828 PCDHGA11Q9Y5H2 935 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 FXYD6-FXYD2A0A087WZ82 144 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 SMIM30A4D0T7 59 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 CD2P06729 351 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 ERVK-8P63133 956 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 HERC3Q15034 1050 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 PRPF38BQ5VTL8 546 aaKnown RBP17.6■□□□□ 0.41
COL5A3-201ENST00000264828 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.6■□□□□ 0.41
COL5A3-201ENST00000264828 ZNF598Q86UK7 904 aaKnown RBP17.6■□□□□ 0.41
COL5A3-201ENST00000264828 FXYD6Q9H0Q3 95 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 GLTPD2A6NH11 291 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 RHPN2P1A8MT19 583 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 CXorf49A8MYA2 514 aaPredicted RBP17.6■□□□□ 0.41
COL5A3-201ENST00000264828 K7EPI3 171 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 NFATC1O95644 943 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 GRIA1P42261 906 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 DAOAP59103 153 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 ATAT1Q5SQI0 421 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 INO80EQ8NBZ0 244 aaPredicted RBP17.6■□□□□ 0.41
COL5A3-201ENST00000264828 OR10Q1Q8NGQ4 319 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 SMG7Q92540 1137 aaKnown RBP17.6■□□□□ 0.41
COL5A3-201ENST00000264828 HIST1H2AAQ96QV6 131 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 OR52B2Q96RD2 323 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 NIPSNAP2O75323 286 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 RB1P06400 928 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 SELPP16109 830 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 NSG1P42857 185 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 PNLIPRP1P54315 467 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 OR12D2P58182 307 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 CBLBQ13191 982 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 ZNF676Q8N7Q3 588 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 CRELD1Q96HD1 420 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 ELOA3DA6NLF2 546 aaPredicted RBP17.59■□□□□ 0.41
COL5A3-201ENST00000264828 SLC38A8A6NNN8 435 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 J3QRK9 145 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 PDX1P52945 283 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 SLC3A1Q07837 685 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 DSC3Q14574 896 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 ELOA3BQ3SY89 546 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 PRSS55Q6UWB4 352 aaPredicted RBP17.59■□□□□ 0.41
COL5A3-201ENST00000264828 ELOA3Q8NG57 546 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 FBXL8Q96CD0 374 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 TTYH2Q9BSA4 534 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 SPATA9Q9BWV2 254 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 DCSTAMPQ9H295 470 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 ADAP2Q9NPF8 381 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 PNO1Q9NRX1 252 aaKnown RBP17.59■□□□□ 0.41
COL5A3-201ENST00000264828 PEAK1Q9H792 1746 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 LAG3P18627 525 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 CTSOP43234 321 aaPredicted RBP17.59■□□□□ 0.41
COL5A3-201ENST00000264828 AP1S1P61966 158 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 CAP1Q01518 475 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 GPR68Q15743 365 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 SLC2A7Q6PXP3 512 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 SLC24A5Q71RS6 500 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 ERI1Q8IV48 349 aaKnown RBP17.59■□□□□ 0.41
COL5A3-201ENST00000264828 TOMM5Q8N4H5 51 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 PROKR2Q8NFJ6 384 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 DCAKDQ8WVC6 231 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 ACBD6Q9BR61 282 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 TREM1Q9NP99 234 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 YJEFN3A6XGL0 299 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 SLC7A4O43246 635 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 TBX10O75333 385 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 SNHG28P0DPA3 235 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 SLC6A4P31645 630 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 MAPK14Q16539 360 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 FUT10Q6P4F1 479 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 HID1Q8IV36 788 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 CNDP2Q96KP4 475 aaKnown RBP17.59■□□□□ 0.41
COL5A3-201ENST00000264828 PKP4Q99569 1192 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 RNF121Q9H920 327 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 MKKSQ9NPJ1 570 aaPredicted RBP17.59■□□□□ 0.41
COL5A3-201ENST00000264828 ABCB8Q9NUT2 735 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 OXSMQ9NWU1 459 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 CNTN3Q9P232 1028 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 IGSF9Q9P2J2 1179 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 HK1P19367 917 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 S100A2P29034 98 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 DNAJA1P31689 397 aaKnown RBP17.59■□□□□ 0.41
COL5A3-201ENST00000264828 DGKQP52824 942 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 S100A10P60903 97 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 PAQR3Q6TCH7 311 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 LMO7Q8WWI1 1683 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 TTYH3Q9C0H2 523 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 ZNF350Q9GZX5 532 aa17.59■□□□□ 0.41
COL5A3-201ENST00000264828 TFB2MQ9H5Q4 396 aaKnown RBP17.59■□□□□ 0.41
COL5A3-201ENST00000264828 ECI2O75521 394 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 ZNF3P17036 446 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 IMPDH1P20839 514 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 WDR4P57081 412 aaKnown RBP17.58■□□□□ 0.41
COL5A3-201ENST00000264828 PLEKHG6Q3KR16 790 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 TPRG1LQ5T0D9 272 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 C6orf183Q5T699 404 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 VITQ6UXI7 678 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 OR2L8Q8NGY9 312 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 COL21A1Q96P44 957 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms