RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ADAP2Q9NPF8 381 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 DNAAF2Q9NVR5 837 aaKnown RBP13.66□□□□□ -0.22
CDH3-201ENST00000264012 GIMAP2Q9UG22 337 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 RNF11Q9Y3C5 154 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 PKD1L3Q7Z443 1732 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 C2orf78A6NCI8 922 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 HAT1O14929 419 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 CASKO14936 926 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 OR1I1O60431 355 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 TPST2O60704 377 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 OR5F1O95221 314 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 IL7RP16871 459 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 ENGP17813 658 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 RPL10P27635 214 aaKnown RBP13.66□□□□□ -0.22
CDH3-201ENST00000264012 STAT5AP42229 794 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 CRISP3P54108 245 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 LMAN2Q12907 356 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 TMPRSS11AQ6ZMR5 421 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 ZNF554Q86TJ5 538 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 COX18Q8N8Q8 333 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 ZNF641Q96N77 438 aaPredicted RBP13.66□□□□□ -0.22
CDH3-201ENST00000264012 ZNF347Q96SE7 839 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 RAD9AQ99638 391 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 GALNT8Q9NY28 637 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 MYO9BQ13459 2157 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 ALDH4A1P30038 563 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 STK19P49842 368 aaPredicted RBP13.65□□□□□ -0.22
CDH3-201ENST00000264012 MYBPC1Q00872 1141 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 SLC13A2Q13183 592 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 RANBP3LQ86VV4 465 aaPredicted RBP13.65□□□□□ -0.22
CDH3-201ENST00000264012 KAT2AQ92830 837 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 RGMAQ96B86 450 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 ZNF570Q96NI8 536 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 FCRL4Q96PJ5 515 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 TMLHEQ9NVH6 421 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 DHRS7Q9Y394 339 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 TMED5Q9Y3A6 229 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 MPZL2O60487 215 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 TRMUO75648 421 aaKnown RBP13.65□□□□□ -0.22
CDH3-201ENST00000264012 CYP11A1P05108 521 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 KLK1P06870 262 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 RHOP08100 348 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 CSNK2A2P19784 350 aaPredicted RBP13.65□□□□□ -0.22
CDH3-201ENST00000264012 MPIP34949 423 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 IL12RB1P42701 662 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 SCARB2Q14108 478 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 CYS1Q717R9 158 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 CMTM7Q96FZ5 175 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 C5orf34Q96MH7 638 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 GPATCH1Q9BRR8 931 aaKnown RBP13.65□□□□□ -0.22
CDH3-201ENST00000264012 SLC35A5Q9BS91 424 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 PTTG2Q9NZH5 202 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 FZD4Q9ULV1 537 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 BACE2Q9Y5Z0 518 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 ERI3O43414 337 aaKnown RBP13.65□□□□□ -0.22
CDH3-201ENST00000264012 PSMA1P25786 263 aaKnown RBP13.65□□□□□ -0.22
CDH3-201ENST00000264012 FOXM1Q08050 763 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 GPR153Q6NV75 609 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 MRPL10Q7Z7H8 261 aaKnown RBP13.65□□□□□ -0.22
CDH3-201ENST00000264012 OXR1Q8N573 874 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 FAM110BQ8TC76 370 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 CD244Q9BZW8 370 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 OAZ3Q9UMX2 235 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 PRKD3O94806 890 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 EDN1P05305 212 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 PGRP06401 933 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 HNF1BP35680 557 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 IGFALSP35858 605 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 PREPP48147 710 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 AGTR2P50052 363 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 DPY19L3Q6ZPD9 716 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 TSTD1Q8NFU3 115 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 SCAMP4Q969E2 229 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 GAL3ST4Q96RP7 486 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 EXO5Q9H790 373 aa13.65□□□□□ -0.22
CDH3-201ENST00000264012 PGRMC2O15173 223 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 DAG1Q14118 895 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 LRRTM3Q86VH5 581 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.64□□□□□ -0.23
CDH3-201ENST00000264012 PRSS58Q8IYP2 241 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 ZNF354BQ96LW1 612 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 ZNF778Q96MU6 729 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 TRPM3Q9HCF6 1732 aaPredicted RBP13.64□□□□□ -0.23
CDH3-201ENST00000264012 C11orf16Q9NQ32 467 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 SPHK2Q9NRA0 654 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 CTPS2Q9NRF8 586 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 SPATA7Q9P0W8 599 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 RIIAD1A6NNX1 92 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 TEX28O15482 410 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 EDIL3O43854 480 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 LEFTY1O75610 366 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 KRT33AO76009 404 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 EMX2Q04743 252 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 SP140Q13342 867 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 SPANXN4Q5MJ08 99 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 OAFQ86UD1 273 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 OR5AK3PQ8NH89 298 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 SYT11Q9BT88 431 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 WDR12Q9GZL7 423 aaKnown RBP13.64□□□□□ -0.23
CDH3-201ENST00000264012 NECTIN3Q9NQS3 549 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms