RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 A6NL46 340 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 MTX2O75431 263 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 PGRP06401 933 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 HOXB6P17509 224 aaKnown RBP15.88■□□□□ 0.13
CTCF-201ENST00000264010 ARSIQ5FYB1 569 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 GAREM2Q75VX8 874 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 UBE2Q1Q7Z7E8 422 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 GPR26Q8NDV2 337 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 PHF21AQ96BD5 680 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 SLC47A1Q96FL8 570 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 PLEKHA8Q96JA3 519 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 BRINP2Q9C0B6 783 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 HEBP1Q9NRV9 189 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 GMEB1Q9Y692 573 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 KLK8O60259 260 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 ERN1O75460 977 aaKnown RBP15.88■□□□□ 0.13
CTCF-201ENST00000264010 WISP3O95389 354 aaPredicted RBP15.88■□□□□ 0.13
CTCF-201ENST00000264010 PRAMEF12O95522 483 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 IL12RB1P42701 662 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 MTHFRP42898 656 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 NAE1Q13564 534 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 PTCHD3Q3KNS1 767 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 LY6G5CQ5SRR4 150 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 INTS11Q5TA45 600 aaKnown RBP15.88■□□□□ 0.13
CTCF-201ENST00000264010 ZNF697Q5TEC3 545 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 TMEM25Q86YD3 366 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 RGL4Q8IZJ4 473 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 ISG20Q96AZ6 181 aaKnown RBP15.88■□□□□ 0.13
CTCF-201ENST00000264010 RHBDF1Q96CC6 855 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 ZNF696Q9H7X3 374 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 CD320Q9NPF0 282 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 SH3BP4Q9P0V3 963 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 STOML2Q9UJZ1 356 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 PTBP2Q9UKA9 531 aaKnown RBP15.88■□□□□ 0.13
CTCF-201ENST00000264010 KCNE2Q9Y6J6 123 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 GRXCR2A6NFK2 248 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 FZD6O60353 706 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 SH3BGRLO75368 114 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 HOXD11P31277 338 aaPredicted RBP15.88■□□□□ 0.13
CTCF-201ENST00000264010 PTGS2P35354 604 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 CTSOP43234 321 aaPredicted RBP15.88■□□□□ 0.13
CTCF-201ENST00000264010 RELAQ04206 551 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 PTGR1Q14914 329 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 SPANXN4Q5MJ08 99 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 PLEKHS1Q5SXH7 462 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 METTL2BQ6P1Q9 378 aaKnown RBP15.88■□□□□ 0.13
CTCF-201ENST00000264010 GANCQ8TET4 914 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 PANX1Q96RD7 426 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 VN1R3Q9BXE9 311 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 ITM2CQ9NQX7 267 aa15.88■□□□□ 0.13
CTCF-201ENST00000264010 EIF3FO00303 357 aaPredicted RBP15.87■□□□□ 0.13
CTCF-201ENST00000264010 HS6ST1O60243 411 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 HSMCR30P0CW71 290 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 MAPK9P45984 424 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 GPNMBQ14956 572 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 SPESP1Q6UW49 350 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 SBSNQ6UWP8 590 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 ADGRG2Q8IZP9 1017 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 DEPDC4Q8N2C3 294 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 HM13Q8TCT9 377 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 PAWRQ96IZ0 340 aaKnown RBP15.87■□□□□ 0.13
CTCF-201ENST00000264010 SLC46A2Q9BY10 475 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 PRRC2BQ5JSZ5 2229 aaKnown RBP15.87■□□□□ 0.13
CTCF-201ENST00000264010 ADH1CP00326 375 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 HPCAL1P37235 193 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 CAPGP40121 348 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 SPINT3P49223 89 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 BCAP31P51572 246 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 RFTN2Q52LD8 501 aaPredicted RBP15.87■□□□□ 0.13
CTCF-201ENST00000264010 CEP78Q5JTW2 689 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 DEPDC1Q5TB30 811 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 MBOAT1Q6ZNC8 495 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 OR8J3Q8NGG0 315 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 CYB5D2Q8WUJ1 264 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 SIPA1Q96FS4 1042 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 RIOK2Q9BVS4 552 aaKnown RBP15.87■□□□□ 0.13
CTCF-201ENST00000264010 CFHR5Q9BXR6 569 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 RDH14Q9HBH5 336 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 PCDHB3Q9Y5E6 796 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 A0A1W2PQ72 361 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 UPK3BL1B0FP48 263 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 UPK3BL2E5RIL1 263 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 CXCR6O00574 342 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 TSPAN12O95859 305 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 TTKP33981 857 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 CDKL1Q00532 357 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 TIAL1Q01085 375 aaKnown RBP eCLIP15.87■□□□□ 0.13
CTCF-201ENST00000264010 SP140Q13342 867 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 KRT33BQ14525 404 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 TCTN1Q2MV58 587 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 PPP2R2DQ66LE6 453 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 TMEM26Q6ZUK4 368 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 NUDT18Q6ZVK8 323 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 YAF2Q8IY57 180 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 C8orf59Q8N0T1 100 aaPredicted RBP15.87■□□□□ 0.13
CTCF-201ENST00000264010 CLIP4Q8N3C7 705 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 SPHK2Q9NRA0 654 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 KLHL42Q9P2K6 505 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 SLC22A14Q9Y267 594 aa15.87■□□□□ 0.13
CTCF-201ENST00000264010 NADKO95544 446 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms