RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CPLX4Q7Z7G2 160 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 SLC9B2Q86UD5 537 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 CRLF3Q8IUI8 442 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 OR4F6Q8NGB9 312 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 MAPK15Q8TD08 544 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 AGAP11Q8TF27 550 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 SH3KBP1Q96B97 665 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 LOXL4Q96JB6 756 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 PPP1R36Q96LQ0 422 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 C7orf26Q96N11 449 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 CCT8L2Q96SF2 557 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 ELAC2Q9BQ52 826 aaKnown RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 SGPP1Q9BX95 441 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 ILKAPQ9H0C8 392 aaPredicted RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 NPHS2Q9NP85 383 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 TAC3Q9UHF0 121 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 RNF11Q9Y3C5 154 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 RAP2CQ9Y3L5 183 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 OR6C74A6NCV1 312 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 E7EQ34 232 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 KHNYNO15037 678 aaKnown RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 TYRP1P17643 537 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 POLR2CP19387 275 aaPredicted RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 VARSP26640 1264 aaKnown RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 NDUFS1P28331 727 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 DPP6P42658 865 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 RPL14P50914 215 aaKnown RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 MEF2AQ02078 507 aaPredicted RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 CDC16Q13042 620 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 LCP2Q13094 533 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 ARHGAP19Q14CB8 494 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 PLA2G2CQ5R387 149 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 CATSPEREQ5SY80 951 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 C6orf132Q5T0Z8 1188 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 VWA5B1Q5TIE3 1220 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 PRAMEF13Q5VWM6 474 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 LAIR1Q6GTX8 287 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 SCIMPQ6UWF3 145 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 TMEM26Q6ZUK4 368 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 GPRIN3Q6ZVF9 776 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 LRRC70Q7Z2Q7 622 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 MAVSQ7Z434 540 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 ZNF438Q7Z4V0 828 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 MILR1Q7Z6M3 343 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 AMIGO1Q86WK6 493 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 MYLK4Q86YV6 388 aaPredicted RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 SLC35F3Q8IY50 421 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 ADGRF3Q8IZF5 1079 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 MINDY1Q8N5J2 469 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 EID2Q8N6I1 236 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 CDYL2Q8N8U2 506 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 GPR156Q8NFN8 814 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 OR2L8Q8NGY9 312 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 OR10G6Q8NH81 332 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 ATOH1Q92858 354 aaPredicted RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 NEIL2Q969S2 332 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 PPM1MQ96MI6 270 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 NUSAP1Q9BXS6 441 aaKnown RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 SRMSQ9H3Y6 488 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 CCDC177Q9NQR7 707 aaPredicted RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 POT1Q9NUX5 634 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 CUEDC1Q9NWM3 386 aaPredicted RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 SPATA7Q9P0W8 599 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 DCTN4Q9UJW0 460 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 KLHL20Q9Y2M5 609 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 PTGDR2Q9Y5Y4 395 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 CSNK1G3Q9Y6M4 447 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 RNF215Q9Y6U7 377 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 UNC13CQ8NB66 2214 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 LNP1A1A4G5 178 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 ISM1B1AKI9 464 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 FFAR3O14843 346 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 CLGNO14967 610 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 GPR42O15529 346 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 PRICKLE3O43900 615 aaPredicted RBP9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 NRP2O60462 931 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 SKAP2O75563 359 aaPredicted RBP9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 CER1O95813 267 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 SYPP08247 313 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 CHRM5P08912 532 aaPredicted RBP9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 CDH1P12830 882 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 SLC2A4P14672 509 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 CD22P20273 847 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 SERPINB5P36952 375 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 PPP1CAP62136 330 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 SPEM2Q0P670 501 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 PRKAA1Q13131 559 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 CHIT1Q13231 466 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 BIRC2Q13490 618 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 DOC2AQ14183 400 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 PDCD2Q16342 344 aaPredicted RBP9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 UGT3A2Q3SY77 523 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 TUBB8Q3ZCM7 444 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 C14orf28Q4W4Y0 310 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 IL27RAQ6UWB1 636 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 TRIM73Q86UV7 250 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 C17orf82Q86X59 251 aaPredicted RBP9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 WDR75Q8IWA0 830 aaKnown RBP9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 KLHDC8AQ8IYD2 350 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms