RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 A6NL46 340 aa17.5■□□□□ 0.39
TRAF4-201ENST00000262395 M0QX08 132 aa17.5■□□□□ 0.39
TRAF4-201ENST00000262395 PCDHGA12O60330 932 aa17.5■□□□□ 0.39
TRAF4-201ENST00000262395 SH3BGRLO75368 114 aa17.5■□□□□ 0.39
TRAF4-201ENST00000262395 DSC3Q14574 896 aa17.5■□□□□ 0.39
TRAF4-201ENST00000262395 MAD2L1BPQ15013 274 aaPredicted RBP17.5■□□□□ 0.39
TRAF4-201ENST00000262395 SF1Q15637 639 aaKnown RBP17.5■□□□□ 0.39
TRAF4-201ENST00000262395 RFX4Q33E94 735 aa17.5■□□□□ 0.39
TRAF4-201ENST00000262395 USP50Q70EL3 339 aaPredicted RBP17.5■□□□□ 0.39
TRAF4-201ENST00000262395 ZNF566Q969W8 418 aa17.5■□□□□ 0.39
TRAF4-201ENST00000262395 ASB8Q9H765 288 aa17.5■□□□□ 0.39
TRAF4-201ENST00000262395 MARCH7Q9H992 704 aa17.5■□□□□ 0.39
TRAF4-201ENST00000262395 OLA1Q9NTK5 396 aaKnown RBP17.5■□□□□ 0.39
TRAF4-201ENST00000262395 LAMA2P24043 3122 aaKnown RBP17.49■□□□□ 0.39
TRAF4-201ENST00000262395 H3BNC9 293 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 RFXANKO14593 260 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 DNAJB5O75953 348 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 TGFBR2P37173 567 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 NUDT6P53370 316 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 STEAP3Q658P3 488 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 PDE12Q6L8Q7 609 aaKnown RBP17.49■□□□□ 0.39
TRAF4-201ENST00000262395 GLB1LQ6UWU2 654 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 ADGRG2Q8IZP9 1017 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 PHF10Q8WUB8 498 aaKnown RBP17.49■□□□□ 0.39
TRAF4-201ENST00000262395 SKA2Q8WVK7 121 aaPredicted RBP17.49■□□□□ 0.39
TRAF4-201ENST00000262395 DNASE1L2Q92874 299 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 UROC1Q96N76 676 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 KCNC2Q96PR1 638 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 PRM3Q9NNZ6 103 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 AASDHPPTQ9NRN7 309 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 IL17CQ9P0M4 197 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 NT5C1B-RDH14C9J2C7 533 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 DNTTP04053 509 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 COL6A1P12109 1028 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 EPB42P16452 691 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 PPP5CP53041 499 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 CASP9P55211 416 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 CYP4F2P78329 520 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 RPP38P78345 283 aaKnown RBP17.49■□□□□ 0.39
TRAF4-201ENST00000262395 CACNG1Q06432 222 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 MAD2L1Q13257 205 aaPredicted RBP17.49■□□□□ 0.39
TRAF4-201ENST00000262395 IL18R1Q13478 541 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 CLLU1OSQ5K130 101 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 ATAD3BQ5T9A4 648 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 KDM4DQ6B0I6 523 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 CAPN13Q6MZZ7 669 aaPredicted RBP17.49■□□□□ 0.39
TRAF4-201ENST00000262395 SNX20Q7Z614 316 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 LYSMD2Q8IV50 215 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 GLB1L3Q8NCI6 653 aaPredicted RBP17.49■□□□□ 0.39
TRAF4-201ENST00000262395 SELENOMQ8WWX9 145 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 FUBP3Q96I24 572 aaKnown RBP eCLIP17.49■□□□□ 0.39
TRAF4-201ENST00000262395 APOL4Q9BPW4 351 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 GPR62Q9BZJ7 368 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 MAGIXQ9H6Y5 334 aa17.49■□□□□ 0.39
TRAF4-201ENST00000262395 TRMT13Q9NUP7 481 aaKnown RBP17.49■□□□□ 0.39
TRAF4-201ENST00000262395 HTTP42858 3142 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.48■□□□□ 0.39
TRAF4-201ENST00000262395 K7ERQ8 282 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 WBP4O75554 376 aaKnown RBP17.48■□□□□ 0.39
TRAF4-201ENST00000262395 CPSF4O95639 269 aaKnown RBP17.48■□□□□ 0.39
TRAF4-201ENST00000262395 KLKB1P03952 638 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 JUNDP17535 347 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 TCEA1P23193 301 aaKnown RBP17.48■□□□□ 0.39
TRAF4-201ENST00000262395 GADD45AP24522 165 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 EIF2DP41214 584 aaKnown RBP17.48■□□□□ 0.39
TRAF4-201ENST00000262395 ZNF177Q13360 481 aaPredicted RBP17.48■□□□□ 0.39
TRAF4-201ENST00000262395 BCL2A1Q16548 175 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 ZNF621Q6ZSS3 439 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 ARMCX6Q7L4S7 300 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 CAPSLQ8WWF8 208 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 WBP2Q969T9 261 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 APOLD1Q96LR9 279 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 NDEL1Q9GZM8 345 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 EHD1Q9H4M9 534 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 SLC45A1Q9Y2W3 748 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 M0R129 80 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 AGRPO00253 132 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 KCNK2O95069 426 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 PAX3P23760 479 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 PTPN6P29350 595 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 ARF5P84085 180 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 ZC3H12BQ5HYM0 836 aaKnown RBP17.48■□□□□ 0.39
TRAF4-201ENST00000262395 SPATC1Q76KD6 591 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 RTN4RL1Q86UN2 441 aaPredicted RBP17.48■□□□□ 0.39
TRAF4-201ENST00000262395 KCNH6Q9H252 994 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 IL37Q9NZH6 218 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 PIKFYVEQ9Y2I7 2098 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 SNPHO15079 494 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 AIREO43918 545 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 ERN1O75460 977 aaKnown RBP17.48■□□□□ 0.39
TRAF4-201ENST00000262395 RGS4P49798 205 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 APIPQ96GX9 242 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 RMND5AQ9H871 391 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 IL1RAPQ9NPH3 570 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 OSGIN1Q9UJX0 560 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 OARD1Q9Y530 152 aa17.48■□□□□ 0.39
TRAF4-201ENST00000262395 OR2A25A4D2G3 310 aa17.47■□□□□ 0.39
TRAF4-201ENST00000262395 FABP3P05413 133 aa17.47■□□□□ 0.39
TRAF4-201ENST00000262395 MZF1P28698 734 aaPredicted RBP17.47■□□□□ 0.39
TRAF4-201ENST00000262395 GRK5P34947 590 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms