RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 LEF1Q9UJU2 399 aaPredicted RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 CDH7Q9ULB5 785 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 PLAGL1Q9UM63 463 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 PCDHA9Q9Y5H5 950 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 SNX13Q9Y5W8 968 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 NUP214P35658 2090 aaPredicted RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 FAM149AA5PLN7 773 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 IGLON5A6NGN9 336 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 EEDO75530 441 aaKnown RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 TIE1P35590 1138 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 GSK3BP49841 420 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 ENTPD1P49961 510 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 NFE2L1Q14494 772 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 PDGFRLQ15198 375 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 GTDC1Q4AE62 458 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 ZNF362Q5T0B9 420 aaPredicted RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 ERN2Q76MJ5 926 aaKnown RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 PATL1Q86TB9 770 aaKnown RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 ANKRD46Q86W74 232 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 EGLN2Q96KS0 407 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 PPP3R2Q96LZ3 170 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 GDE1Q9NZC3 331 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 ZIM2Q9NZV7 527 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 TRPS1Q9UHF7 1281 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 AP4S1Q9Y587 144 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 CFAP20Q9Y6A4 193 aaKnown RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 PRSS51A0A1B0GVH4 220 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 AXIN1O15169 862 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 DFNA5O60443 496 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 PCDH8O95206 1070 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 PORP16435 677 aaPredicted RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 ZNF8P17098 575 aaPredicted RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 EFNA1P20827 205 aaPredicted RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 PRLHRP49683 370 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 TCEA2Q15560 299 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 XKR6Q5GH73 641 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 AGTRAPQ6RW13 159 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 TRMT11Q7Z4G4 463 aaKnown RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 THOC6Q86W42 341 aaKnown RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 MINDY1Q8N5J2 469 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 GIPC3Q8TF64 312 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 PPWD1Q96BP3 646 aaKnown RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 TIFAQ96CG3 184 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 APOLD1Q96LR9 279 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 HOPXQ9BPY8 73 aaPredicted RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 DPY30Q9C005 99 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 ARMC7Q9H6L4 198 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 STOX2Q9P2F5 926 aaPredicted RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 DMTF1Q9Y222 760 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 EIF3LQ9Y262 564 aaKnown RBP13.19□□□□□ -0.3
VMP1-201ENST00000262291 TRIOO75962 3097 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 KCNE1BA0A087WTH5 132 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 H3BM21 787 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 SLC28A1O00337 649 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 IFRD1O00458 451 aaPredicted RBP13.18□□□□□ -0.3
VMP1-201ENST00000262291 AKAP10O43572 662 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 AP2A2O94973 939 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 STAMBPO95630 424 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 KRT6AP02538 564 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 KRT6BP04259 564 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 POU2F2P09086 479 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 BCKDHAP12694 445 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 NELFEP18615 380 aaKnown RBP13.18□□□□□ -0.3
VMP1-201ENST00000262291 OXTRP30559 389 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 KRT6CP48668 564 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 IRF8Q02556 426 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 STARD3Q14849 445 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 NRF1Q16656 503 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 FAM83HQ6ZRV2 1179 aaPredicted RBP13.18□□□□□ -0.3
VMP1-201ENST00000262291 LRRC70Q7Z2Q7 622 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 CYP2U1Q7Z449 544 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 ZNF547Q8IVP9 402 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 CPA6Q8N4T0 437 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 TMIEQ8NEW7 156 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 CXorf40AQ8TE69 158 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 TMIGD2Q96BF3 282 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 OR4K3Q96R72 315 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 LGR4Q9BXB1 951 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 SELENONQ9NZV5 590 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 KLHL42Q9P2K6 505 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 SH2B3Q9UQQ2 575 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 TRPM6Q9BX84 2022 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 SLC5A10A0PJK1 596 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 HTR3EA5X5Y0 456 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 GSNP06396 782 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 GSTM1P09488 218 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 PIM1P11309 404 aaPredicted RBP13.18□□□□□ -0.3
VMP1-201ENST00000262291 OR4D2P58180 307 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 MYBPC1Q00872 1141 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 RHDQ02161 417 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 C2orf27AQ580R0 203 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 MTX3Q5HYI7 312 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 OGFRL1Q5TC84 451 aaPredicted RBP13.18□□□□□ -0.3
VMP1-201ENST00000262291 AADATQ8N5Z0 425 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 USP7Q93009 1102 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 IL17FQ96PD4 163 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 VPS35Q96QK1 796 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 MYOCQ99972 504 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 KCTD14Q9BQ13 255 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms