RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 ANKRD13BQ86YJ7 626 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 TRAPPC5Q8IUR0 188 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 PGBD5Q8N414 524 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 TMEM151AQ8N4L1 468 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 PACRGLQ8N7B6 248 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 SCAIQ8N9R8 606 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 POF1BQ8WVV4 589 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 COL26A1Q96A83 441 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 TBX5Q99593 518 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 SMG9Q9H0W8 520 aaKnown RBP9.86□□□□□ -0.83
PALB2-201ENST00000261584 TBC1D17Q9HA65 648 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 ZDHHC4Q9NPG8 344 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 EQTNQ9NQ60 294 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 TREX1Q9NSU2 369 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 PCTPQ9UKL6 214 aa9.86□□□□□ -0.83
PALB2-201ENST00000261584 PHLPP1O60346 1717 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 CLDN9O95484 217 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 C9P02748 559 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 CAPNS1P04632 268 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 BCKDHAP12694 445 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 CREMQ03060 361 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 PTCHD3Q3KNS1 767 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 UBXN11Q5T124 520 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 ASB18Q6ZVZ8 466 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 SHFQ7M4L6 423 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 ZNF641Q96N77 438 aaPredicted RBP9.85□□□□□ -0.83
PALB2-201ENST00000261584 ZNF599Q96NL3 588 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 CORO1BQ9BR76 489 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 TMEM121BQ9BXQ6 578 aaPredicted RBP9.85□□□□□ -0.83
PALB2-201ENST00000261584 AMBRA1Q9C0C7 1298 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 ATP13A3Q9H7F0 1226 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 ZNF624Q9P2J8 865 aaPredicted RBP9.85□□□□□ -0.83
PALB2-201ENST00000261584 PTBP2Q9UKA9 531 aaKnown RBP9.85□□□□□ -0.83
PALB2-201ENST00000261584 RNF6Q9Y252 685 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 DLGAP4Q9Y2H0 992 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 CFAP20Q9Y6A4 193 aaKnown RBP9.85□□□□□ -0.83
PALB2-201ENST00000261584 FAM92AA1XBS5 289 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 OR6C70A6NIJ9 312 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 ANKRD66B4E2M5 251 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 M0QX08 132 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 ERAL1O75616 437 aaKnown RBP9.85□□□□□ -0.83
PALB2-201ENST00000261584 HSD17B1P14061 328 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 TMBIM6P55061 237 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 INAVAQ3KP66 663 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 ATP13A5Q4VNC0 1218 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 CATSPEREQ5SY80 951 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 MAMDC4Q6UXC1 1216 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 CEP68Q76N32 757 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 ZNF420Q8TAQ5 688 aaPredicted RBP9.85□□□□□ -0.83
PALB2-201ENST00000261584 PTCD2Q8WV60 388 aaKnown RBP9.85□□□□□ -0.83
PALB2-201ENST00000261584 TVP23BQ9NYZ1 205 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 SPATA7Q9P0W8 599 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 GIT1Q9Y2X7 761 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 PCDHB7Q9Y5E2 793 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 MAST2Q6P0Q8 1798 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 LCHNA4D1U4 455 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 CCDC182A6NF36 153 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 MAGEB17A8MXT2 336 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 FAM227AF5H4B4 570 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 SEMA3DO95025 777 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 AIF1P55008 147 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 RACK1P63244 317 aaKnown RBP9.85□□□□□ -0.83
PALB2-201ENST00000261584 ST3GAL4Q11206 333 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 TOP3AQ13472 1001 aaPredicted RBP9.85□□□□□ -0.83
PALB2-201ENST00000261584 UGT8Q16880 541 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 Q6ZSR9 355 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 CYP2U1Q7Z449 544 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 TMEM179BQ7Z7N9 219 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 TIGD4Q8IY51 512 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 MDGA1Q8NFP4 955 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 XAGE5Q8WWM1 108 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 BRI3BPQ8WY22 251 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 RAB8BQ92930 207 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 SCAMP4Q969E2 229 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 MYEOVQ96EZ4 313 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 PYURFQ96I23 114 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 ALPK1Q96QP1 1244 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 TMEM246Q9BRR3 403 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 DSN1Q9H410 356 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 SGK2Q9HBY8 427 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 IL20RAQ9UHF4 553 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 ZNF222Q9UK12 451 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 WDR37Q9Y2I8 494 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 UGT2A1Q9Y4X1 527 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 LAMA3Q16787 3333 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 GLYATL1P3A0A0U1RQE8 302 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 KPNA3O00505 521 aaPredicted RBP9.85□□□□□ -0.83
PALB2-201ENST00000261584 GABRDO14764 452 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 AQP9O43315 295 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 AP1G1O43747 822 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 TLL1O43897 1013 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 PSKH1P11801 424 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 MTHFD2P13995 350 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 TGM4P49221 684 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 RPL26P61254 145 aaKnown RBP9.85□□□□□ -0.83
PALB2-201ENST00000261584 KDELC1Q6UW63 502 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 CCDC149Q6ZUS6 474 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 ZBTB2Q8N680 514 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 OR9Q2Q8NGE9 314 aa9.85□□□□□ -0.83
PALB2-201ENST00000261584 PIGKQ92643 395 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms