RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 CPQQ9Y646 472 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 ZNF99A8MXY4 864 aaPredicted RBP14.82□□□□□ -0.04
DDX56-201ENST00000258772 CFAP99D6REC4 459 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 ANGPTL1O95841 491 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 IGSF6O95976 241 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 IGFBP5P24593 272 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 MAPK1P28482 360 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 SERPINA4P29622 427 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 SP3Q02447 781 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 GSTM4Q03013 218 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 BOP1Q14137 746 aaKnown RBP14.82□□□□□ -0.04
DDX56-201ENST00000258772 SCN5AQ14524 2016 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 CTF1Q16619 201 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 ATP13A5Q4VNC0 1218 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 OR4F3Q6IEY1 312 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 TPRG1Q6ZUI0 275 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 GALNT5Q7Z7M9 940 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 FAM217AQ8IXS0 508 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 L3MBTL4Q8NA19 623 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 PYCR2Q96C36 320 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 AASDHPPTQ9NRN7 309 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 SRRDQ9UH36 339 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 COQ6Q9Y2Z9 468 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 TMED5Q9Y3A6 229 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 SOBPA7XYQ1 873 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 UGT2B11O75310 529 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 SULT1C4O75897 302 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 ZNF682O95780 498 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 AOAHP28039 575 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 HSPA14Q0VDF9 509 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 LMAN2Q12907 356 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 PTCHD3Q3KNS1 767 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 LRRC66Q68CR7 880 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 OR2T5Q6IEZ7 315 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 NEK5Q6P3R8 708 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 CEP68Q76N32 757 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 SERPINA11Q86U17 422 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 ELMOD1Q8N336 334 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 TCAIMQ8N3R3 496 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 OR2AP1Q8NGE2 309 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 OR2T29Q8NH02 315 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 FAR1Q8WVX9 515 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 VOPP1Q96AW1 172 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 ASIC4Q96FT7 647 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 SCRN2Q96FV2 425 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 APOLD1Q96LR9 279 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 IL1RAPQ9NPH3 570 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 ABCB8Q9NUT2 735 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 ABCG2Q9UNQ0 655 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 ERGIC3Q9Y282 383 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 DGKBQ9Y6T7 804 aa14.82□□□□□ -0.04
DDX56-201ENST00000258772 EVPLLA8MZ36 301 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 NPIPB8E9PQR5 432 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 EIF3FO00303 357 aaPredicted RBP14.81□□□□□ -0.04
DDX56-201ENST00000258772 PRAMEF4O60810 478 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 C1QCP02747 245 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 HIST1H2AGP0C0S8 130 aaPredicted RBP14.81□□□□□ -0.04
DDX56-201ENST00000258772 PCSK2P16519 638 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 AMD1P17707 334 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 HIST1H2ADP20671 130 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 SLC6A12P48065 614 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 DAPP51397 102 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 PTSQ03393 145 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 GTF2H3Q13889 308 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 SIM2Q14190 667 aaPredicted RBP14.81□□□□□ -0.04
DDX56-201ENST00000258772 LAPTM4AQ15012 233 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 PRAMEF9Q5VWM5 478 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 RFLNAQ6ZTI6 216 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 SETD9Q8NE22 299 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 SKA2Q8WVK7 121 aaPredicted RBP14.81□□□□□ -0.04
DDX56-201ENST00000258772 ASB11Q8WXH4 323 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 HIST1H2AHQ96KK5 128 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 FAM210AQ96ND0 272 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 HIST1H2AJQ99878 128 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 H2AFJQ9BTM1 129 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 GABARAPL1Q9H0R8 117 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 ZNF334Q9HCZ1 680 aaPredicted RBP14.81□□□□□ -0.04
DDX56-201ENST00000258772 MBD1Q9UIS9 605 aaPredicted RBP14.81□□□□□ -0.04
DDX56-201ENST00000258772 B3GNT3Q9Y2A9 372 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 PRRG1O14668 218 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 ALDH1A1P00352 501 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 C8GP07360 202 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 OR56A5P0C7T3 313 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 FSHRP23945 695 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 KIR3DL1P43629 444 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 HNMTP50135 292 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 ARHGDIAP52565 204 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 HNRNPFP52597 415 aaKnown RBP14.81□□□□□ -0.04
DDX56-201ENST00000258772 PHEXP78562 749 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 ITGADQ13349 1161 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 ATP1A4Q13733 1029 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 LDLRAP1Q5SW96 308 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 KDM4DQ6B0I6 523 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 NOXRED1Q6NXP6 359 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 ZCCHC8Q6NZY4 707 aaKnown RBP14.81□□□□□ -0.04
DDX56-201ENST00000258772 MSANTD1Q6ZTZ1 278 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 IGFN1Q86VF2 1251 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 MCOLN3Q8TDD5 553 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 SH3YL1Q96HL8 342 aaPredicted RBP14.81□□□□□ -0.04
DDX56-201ENST00000258772 ZNF347Q96SE7 839 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms