RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TPSD1Q9BZJ3 242 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 ATG10Q9H0Y0 220 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 TMEM9BQ9NQ34 198 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 ARL5AQ9Y689 179 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 DOCK2Q92608 1830 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 A0A0J9YY10 115 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 ERI3O43414 337 aaKnown RBP13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 RENP00797 406 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 MT-ND5P03915 603 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 DRD2P14416 443 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 NUP62P37198 522 aaPredicted RBP13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 HSPA7P48741 367 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 SLC7A2P52569 658 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 LRRC34Q8IZ02 419 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 LRRC57Q8N9N7 239 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 ROPN1LQ96C74 230 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 HSPA12BQ96MM6 686 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 TAC3Q9UHF0 121 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 PCDHGB1Q9Y5G3 927 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 J3KR12 359 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 TRIM38O00635 465 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 CASKO14936 926 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 GP1BBP13224 206 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 NME5P56597 212 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 RCAN2Q14206 197 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 WASHC2DQ5SRD0 308 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 HDHD5Q9BXW7 423 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 P2RX2Q9UBL9 471 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 GSTK1Q9Y2Q3 226 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 PAK4O96013 591 aaPredicted RBP13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 SERPINA6P08185 405 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 KCNJ2P63252 427 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 CRADDP78560 199 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 DCAF12L1Q5VU92 463 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 AAGABQ6PD74 315 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 TTC33Q6PID6 262 aaPredicted RBP13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 ZNF550Q7Z398 422 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 TWIST2Q8WVJ9 160 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 LPAR4Q99677 370 aa13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 CLK4Q9HAZ1 481 aaKnown RBP13.08□□□□□ -0.32
PRPF38A-201ENST00000257181 OR52E8Q6IFG1 317 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 RPTNQ6XPR3 784 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 ABHD12BQ7Z5M8 362 aaPredicted RBP13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 ARMC8Q8IUR7 673 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 RC3H2Q9HBD1 1191 aaKnown RBP13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 ZNF334Q9HCZ1 680 aaPredicted RBP13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 CKLFQ9UBR5 152 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 TRIM43BA6NCK2 446 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 DLX3O60479 287 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 SERPINI2O75830 405 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 KLHL18O94889 574 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 ITGA3P26006 1051 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 NMBRP28336 390 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 KIAA1024LP59773 190 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 HERVK_113P63132 956 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 BTN3A2P78410 334 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 EFR3AQ14156 821 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 Q6ZSR6 202 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 TMEM25Q86YD3 366 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 CPSF7Q8N684 471 aaKnown RBP13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 TSEN2Q8NCE0 465 aaKnown RBP13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 CAPSLQ8WWF8 208 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 TRIM43Q96BQ3 446 aaPredicted RBP13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 ERVK-6Q9BXR3 956 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 ADAM33Q9BZ11 813 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 NGBQ9NPG2 151 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 ZFR2Q9UPR6 939 aaKnown RBP13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 RIIAD1A6NNX1 92 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 ABCB7O75027 752 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 CNTN5O94779 1100 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 SPINT3P49223 89 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 NCBP2P52298 156 aaKnown RBP eCLIP13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 POLR2JP52435 117 aaKnown RBP13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 TAF5Q15542 800 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 RAB41Q5JT25 222 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 FRG2Q64ET8 278 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 MZT2AQ6P582 158 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 AGTRAPQ6RW13 159 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 DHDDSQ86SQ9 333 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 GPR151Q8TDV0 419 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 FRG2BQ96QU4 278 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 CCNB1IP1Q9NPC3 277 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 COPG2Q9UBF2 871 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 DHRS7Q9Y394 339 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 SNX10Q9Y5X0 201 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 CHST10O43529 356 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 IMPDH1P20839 514 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 ERVFC1P60507 584 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 TMEM198Q66K66 360 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 SNIP1Q8TAD8 396 aaKnown RBP13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 C7orf26Q96N11 449 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 ZIC5Q96T25 663 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 SLC46A2Q9BY10 475 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 RSPH9Q9H1X1 276 aaPredicted RBP13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 TAS2R9Q9NYW1 312 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 USE1Q9NZ43 259 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 C3orf18Q9UK00 162 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 PLLPQ9Y342 182 aa13.07□□□□□ -0.32
PRPF38A-201ENST00000257181 ELOA3DA6NLF2 546 aaPredicted RBP13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 A8MU76 341 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms