RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 TP53BP2Q13625 1128 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 USP39Q53GS9 565 aaKnown RBP13.15□□□□□ -0.3
VHL-201ENST00000256474 USP51Q70EK9 711 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 CYP2U1Q7Z449 544 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 CLIP4Q8N3C7 705 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 DPP10Q8N608 796 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 MTG2Q9H4K7 406 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 WDR70Q9NW82 654 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 TRIM17Q9Y577 477 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 GMEB1Q9Y692 573 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 AREL1O15033 823 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 CRATP43155 626 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 MAD2L1Q13257 205 aaPredicted RBP13.14□□□□□ -0.31
VHL-201ENST00000256474 PCBP2Q15366 365 aaKnown RBP eCLIP13.14□□□□□ -0.31
VHL-201ENST00000256474 SNX20Q7Z614 316 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 SYTL1Q8IYJ3 562 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 OR8J3Q8NGG0 315 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 ZNF510Q9Y2H8 683 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 SH3BP1Q9Y3L3 701 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 SNX8Q9Y5X2 465 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 UNCXA6NJT0 531 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 SCELO95171 688 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 F11P03951 625 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 CHRM5P08912 532 aaPredicted RBP13.14□□□□□ -0.31
VHL-201ENST00000256474 DMC1Q14565 340 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 HKDC1Q2TB90 917 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 DNAJB7Q7Z6W7 309 aaPredicted RBP13.14□□□□□ -0.31
VHL-201ENST00000256474 HDAC2Q92769 488 aaKnown RBP13.14□□□□□ -0.31
VHL-201ENST00000256474 PROX1Q92786 737 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 ISG20Q96AZ6 181 aaKnown RBP13.14□□□□□ -0.31
VHL-201ENST00000256474 MAGED4Q96JG8 741 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 ALOXE3Q9BYJ1 711 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 KAT8Q9H7Z6 458 aaKnown RBP13.14□□□□□ -0.31
VHL-201ENST00000256474 TDRD15B5MCY1 1934 aaKnown RBP13.14□□□□□ -0.31
VHL-201ENST00000256474 TMEM88BA6NKF7 163 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 EPN2O95208 641 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 CCR7P32248 378 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 TMBIM6P55061 237 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 GP2P55259 537 aaKnown RBP13.14□□□□□ -0.31
VHL-201ENST00000256474 VLDLRP98155 873 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 GRIK2Q13002 908 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 SOWAHCQ53LP3 525 aaPredicted RBP13.14□□□□□ -0.31
VHL-201ENST00000256474 RUNDC3AQ59EK9 446 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 RBM48Q5RL73 367 aaKnown RBP13.14□□□□□ -0.31
VHL-201ENST00000256474 IER5LQ5T953 404 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 P2RY8Q86VZ1 359 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 TERB1Q8NA31 727 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 PAPD5Q8NDF8 572 aaKnown RBP13.14□□□□□ -0.31
VHL-201ENST00000256474 OR5AK3PQ8NH89 298 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 C2orf49Q9BVC5 232 aaPredicted RBP13.14□□□□□ -0.31
VHL-201ENST00000256474 P2RY12Q9H244 342 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 REEP1Q9H902 201 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 CFAP97Q9P2B7 532 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 PPT2Q9UMR5 302 aa13.14□□□□□ -0.31
VHL-201ENST00000256474 SEC14L2O76054 403 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 DLGAP3O95886 979 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 SDC1P18827 310 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 CD70P32970 193 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 SOAT1P35610 550 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 SPAM1P38567 509 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 PREPP48147 710 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 CLCN4P51793 760 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 PPP2R2BQ00005 443 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 ZSWIM9Q86XI8 627 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 PDPRQ8NCN5 879 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 OR4K1Q8NGD4 311 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 TMEM121BQ9BXQ6 578 aaPredicted RBP13.13□□□□□ -0.31
VHL-201ENST00000256474 HMG20AQ9NP66 347 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 DCAF13Q9NV06 445 aaKnown RBP13.13□□□□□ -0.31
VHL-201ENST00000256474 SLCO3A1Q9UIG8 710 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 OARD1Q9Y530 152 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 GREB1Q4ZG55 1949 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 REV3LO60673 3130 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 KLK8O60259 260 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 GSTM2P28161 218 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 GABRR2P28476 465 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 MASP1P48740 699 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 ST13P50502 369 aaKnown RBP13.13□□□□□ -0.31
VHL-201ENST00000256474 ACSM2AQ08AH3 577 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 NAE1Q13564 534 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 ACSM2BQ68CK6 577 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 CERS6Q6ZMG9 384 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 DSG4Q86SJ6 1040 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 PIH1D2Q8WWB5 315 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 ZHX1-C8orf76Q96EF9 292 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 HSH2DQ96JZ2 352 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 MARCH7Q9H992 704 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 EXOSC4Q9NPD3 245 aaKnown RBP13.13□□□□□ -0.31
VHL-201ENST00000256474 ABCB8Q9NUT2 735 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 SPASTQ9UBP0 616 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 YIPF1Q9Y548 306 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 A0A096LPI6 279 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 TBX1O43435 398 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 CD36P16671 472 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 ACRV1P26436 265 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 C21orf33P30042 268 aaPredicted RBP13.13□□□□□ -0.31
VHL-201ENST00000256474 ISL1P61371 349 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 COLEC12Q5KU26 742 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 OR2T5Q6IEZ7 315 aa13.13□□□□□ -0.31
VHL-201ENST00000256474 CACUL1Q86Y37 369 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms