RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 ZNF839A8K0R7 811 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 MEI4A8MW99 385 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 ANKRD65E5RJM6 399 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 E7EQ34 232 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 UBDO15205 165 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 HNRNPCL1O60812 293 aaKnown RBP9.15□□□□□ -0.94
NIP7-202ENST00000254941 EML2O95834 649 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 KRT6AP02538 564 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 KRT6BP04259 564 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 WNT1P04628 370 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 ALDOCP09972 364 aaKnown RBP9.15□□□□□ -0.94
NIP7-202ENST00000254941 F3P13726 295 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 JUPP14923 745 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 LBPP18428 481 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 CD22P20273 847 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 BCKDHBP21953 392 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 CALB2P22676 271 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 CASP2P42575 452 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 KRT6CP48668 564 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 HTR6P50406 440 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 BLKP51451 505 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 NCALDP61601 193 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 DMWDQ09019 674 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 ILF3Q12906 894 aaKnown RBP eCLIP9.15□□□□□ -0.94
NIP7-202ENST00000254941 KLF10Q13118 480 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 XKR6Q5GH73 641 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 SLC30A9Q6PML9 568 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 SCIMPQ6UWF3 145 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 SUSD1Q6UWL2 747 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 SLCO4C1Q6ZQN7 724 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 OR2T11Q8NH01 316 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 HMGCLL1Q8TB92 370 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 DNASE2BQ8WZ79 361 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 NEIL2Q969S2 332 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 CAMK1GQ96NX5 476 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 CATSPER2Q96P56 530 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 IL17FQ96PD4 163 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 DUSP15Q9H1R2 295 aaPredicted RBP9.15□□□□□ -0.94
NIP7-202ENST00000254941 PRMT8Q9NR22 394 aaPredicted RBP9.15□□□□□ -0.94
NIP7-202ENST00000254941 RIC8BQ9NVN3 520 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 SPATA6Q9NWH7 488 aaPredicted RBP9.15□□□□□ -0.94
NIP7-202ENST00000254941 SCHIP1Q9P0W5 487 aaPredicted RBP9.15□□□□□ -0.94
NIP7-202ENST00000254941 SNX6Q9UNH7 406 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 CCL27Q9Y4X3 112 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 COPG1Q9Y678 874 aaKnown RBP9.15□□□□□ -0.94
NIP7-202ENST00000254941 CAPN7Q9Y6W3 813 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 COLEC10Q9Y6Z7 277 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 TMEM131Q92545 1883 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 MANBAO00462 879 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 CLGNO14967 610 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 MAOBP27338 520 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 NDUFS1P28331 727 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 HNF4AP41235 474 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 RASSF2P50749 326 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 RAB28P51157 221 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 IRX1P78414 480 aaPredicted RBP9.15□□□□□ -0.95
NIP7-202ENST00000254941 ZNF33BQ06732 778 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 DOC2AQ14183 400 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 KRT33BQ14525 404 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 TCEA2Q15560 299 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 ZRSR2Q15696 482 aaKnown RBP9.15□□□□□ -0.95
NIP7-202ENST00000254941 ATP6AP1LQ52LC2 224 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 LCTLQ6UWM7 567 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 RAB42Q8N4Z0 105 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 LMNTD1Q8N9Z9 388 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 WDR34Q96EX3 536 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 HBEGFQ99075 208 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 HAUS8Q9BT25 410 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 RAB11FIP5Q9BXF6 653 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 GSDMCQ9BYG8 508 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 PCBD2Q9H0N5 130 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 TCEAL2Q9H3H9 227 aaPredicted RBP9.15□□□□□ -0.95
NIP7-202ENST00000254941 EHD1Q9H4M9 534 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 KIR3DX1Q9H7L2 352 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 TM9SF3Q9HD45 589 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 FARSBQ9NSD9 589 aaKnown RBP9.15□□□□□ -0.95
NIP7-202ENST00000254941 ZNF624Q9P2J8 865 aaPredicted RBP9.15□□□□□ -0.95
NIP7-202ENST00000254941 TAGLN3Q9UI15 199 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 ZNF490Q9ULM2 529 aaPredicted RBP9.15□□□□□ -0.95
NIP7-202ENST00000254941 CROCCQ5TZA2 2017 aa9.15□□□□□ -0.95
NIP7-202ENST00000254941 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 SERTM1A2A2V5 107 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 H0YIV9 168 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 TLR4O00206 839 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 SLC28A1O00337 649 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 LSM1O15116 133 aaKnown RBP9.14□□□□□ -0.95
NIP7-202ENST00000254941 PEX11AO75192 247 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 ESRRAP11474 423 aaPredicted RBP9.14□□□□□ -0.95
NIP7-202ENST00000254941 TDGF1P13385 188 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 PRDX6P30041 224 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 ATP4BP51164 291 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 ERVK-8P63133 956 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 ACTN3Q08043 901 aaPredicted RBP9.14□□□□□ -0.95
NIP7-202ENST00000254941 SQLEQ14534 574 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 NAA25Q14CX7 972 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 ZNF542PQ5EBM4 170 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 C6orf136Q5SQH8 315 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 PRAMEF14Q5SWL7 426 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 PRAMEF13Q5VWM6 474 aa9.14□□□□□ -0.95
NIP7-202ENST00000254941 FRG2Q64ET8 278 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms