RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 ITGAXP20702 1163 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 IDSP22304 550 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 MAPK9P45984 424 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 ADARP55265 1226 aaKnown RBP11.74□□□□□ -0.53
NIP7-201ENST00000254940 METRNLQ641Q3 311 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 ACAD11Q709F0 780 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 GPSM1Q86YR5 675 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 HPS6Q86YV9 775 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 DDIASQ8IXT1 998 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 ASZ1Q8WWH4 475 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 CCDC126Q96EE4 140 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 SCARF2Q96GP6 870 aaPredicted RBP11.74□□□□□ -0.53
NIP7-201ENST00000254940 MAELQ96JY0 434 aaKnown RBP11.74□□□□□ -0.53
NIP7-201ENST00000254940 FERD3LQ96RJ6 166 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 POPDC3Q9HBV1 291 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 SEMA4GQ9NTN9 838 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 ASF1AQ9Y294 204 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 DGKBQ9Y6T7 804 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 GPC4O75487 556 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 SNRNP200O75643 2136 aaKnown RBP11.74□□□□□ -0.53
NIP7-201ENST00000254940 LMNAP02545 664 aaKnown RBP11.74□□□□□ -0.53
NIP7-201ENST00000254940 ARRB1P49407 418 aaPredicted RBP11.74□□□□□ -0.53
NIP7-201ENST00000254940 NUDT2P50583 147 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 YBX1P67809 324 aaKnown RBP11.74□□□□□ -0.53
NIP7-201ENST00000254940 NFKB2Q00653 900 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 KRT33BQ14525 404 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 SLC23A3Q6PIS1 610 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 SYVN1Q86TM6 617 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 FAM20CQ8IXL6 584 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 NAGSQ8N159 534 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 NKAPQ8N5F7 415 aaKnown RBP11.74□□□□□ -0.53
NIP7-201ENST00000254940 ZDHHC1Q8WTX9 485 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 PYCR2Q96C36 320 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 RCN3Q96D15 328 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 ZDHHC5Q9C0B5 715 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 OR52A5Q9H2C5 316 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 AKTIPQ9H8T0 292 aa11.74□□□□□ -0.53
NIP7-201ENST00000254940 EML4Q9HC35 981 aaKnown RBP11.74□□□□□ -0.53
NIP7-201ENST00000254940 ZNF624Q9P2J8 865 aaPredicted RBP11.74□□□□□ -0.53
NIP7-201ENST00000254940 F8W8V4 182 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 E2F3O00716 465 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 CFLARO15519 480 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 TAPBPO15533 448 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 DPP6P42658 865 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 HSPA7P48741 367 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 HNRNPKP61978 463 aaKnown RBP eCLIP11.73□□□□□ -0.53
NIP7-201ENST00000254940 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.73□□□□□ -0.53
NIP7-201ENST00000254940 PAOXQ6QHF9 649 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 UBE2R2Q712K3 238 aaPredicted RBP11.73□□□□□ -0.53
NIP7-201ENST00000254940 SCUBE1Q8IWY4 988 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 MYO1HQ8N1T3 1032 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 OXR1Q8N573 874 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 CDYL2Q8N8U2 506 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 KYQ8NBH2 561 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 FAM156AQ8NDB6 213 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 GPBAR1Q8TDU6 330 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 TWIST2Q8WVJ9 160 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 C19orf60Q96EN9 201 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 RNF31Q96EP0 1072 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 ZNF514Q96K75 400 aaPredicted RBP11.73□□□□□ -0.53
NIP7-201ENST00000254940 GSDMCQ9BYG8 508 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 ZNF385DQ9H6B1 395 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 RMI1Q9H9A7 625 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 MEAF6Q9HAF1 191 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 SPASTQ9UBP0 616 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 PCTPQ9UKL6 214 aa11.73□□□□□ -0.53
NIP7-201ENST00000254940 ARHGEF33A8MVX0 844 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 OR4F21O95013 312 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 RETP07949 1114 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 ANXA6P08133 673 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 VCLP18206 1134 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 EPHA8P29322 1005 aaPredicted RBP11.72□□□□□ -0.53
NIP7-201ENST00000254940 BLKP51451 505 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 RPE65Q16518 533 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 PLA2G2CQ5R387 149 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 PEAR1Q5VY43 1037 aaPredicted RBP11.72□□□□□ -0.53
NIP7-201ENST00000254940 Q8N9G6 341 aaPredicted RBP11.72□□□□□ -0.53
NIP7-201ENST00000254940 CEP70Q8NHQ1 597 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 SLC37A2Q8TED4 501 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 SETD7Q8WTS6 366 aaKnown RBP11.72□□□□□ -0.53
NIP7-201ENST00000254940 TFGQ92734 400 aaPredicted RBP11.72□□□□□ -0.53
NIP7-201ENST00000254940 TIMM29Q9BSF4 260 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 TUBB6Q9BUF5 446 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 TRIM8Q9BZR9 551 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 SYNDIG1Q9H7V2 258 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 NOL11Q9H8H0 719 aaKnown RBP11.72□□□□□ -0.53
NIP7-201ENST00000254940 TRNAU1APQ9NX07 287 aaKnown RBP11.72□□□□□ -0.53
NIP7-201ENST00000254940 VTI1BQ9UEU0 232 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 HCN4Q9Y3Q4 1203 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 A0A1B0GTQ1 180 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 AZIN1O14977 448 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 GIMD1P0DJR0 217 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 TCN1P20061 433 aaPredicted RBP11.72□□□□□ -0.53
NIP7-201ENST00000254940 SLC19A1P41440 591 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 DIO3P55073 304 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 PKNOX1P55347 436 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 ATP6V0D1P61421 351 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 RIPK1Q13546 671 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 RBBP7Q16576 425 aa11.72□□□□□ -0.53
NIP7-201ENST00000254940 TTLL9Q3SXZ7 439 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms