RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 KLK4Q9Y5K2 254 aa13.7□□□□□ -0.22
CNN1-201ENST00000252456 MDC1Q14676 2089 aaKnown RBP13.69□□□□□ -0.22
CNN1-201ENST00000252456 LOC101059948A0A1B0GTJ6 334 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 TMEM150CB9EJG8 249 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 TERTO14746 1132 aaKnown RBP13.69□□□□□ -0.22
CNN1-201ENST00000252456 ZBTB14O43829 449 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 NTRK1P04629 796 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 C8GP07360 202 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 LIFP15018 202 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 H2AFXP16104 143 aaPredicted RBP13.69□□□□□ -0.22
CNN1-201ENST00000252456 MAP4P27816 1152 aaKnown RBP13.69□□□□□ -0.22
CNN1-201ENST00000252456 STAT5AP42229 794 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 ATP1A2P50993 1020 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 PNLIPRP1P54315 467 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 IL2P60568 153 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 VAC14Q08AM6 782 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 SP140Q13342 867 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 ZXDCQ2QGD7 858 aaPredicted RBP13.69□□□□□ -0.22
CNN1-201ENST00000252456 MANEAQ5SRI9 462 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 MBOAT1Q6ZNC8 495 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 MYO1HQ8N1T3 1032 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 RAB42Q8N4Z0 105 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 ESX1Q8N693 406 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 IL22RA1Q8N6P7 574 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 PPFIBP2Q8ND30 876 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 PDLIM5Q96HC4 596 aaKnown RBP13.69□□□□□ -0.22
CNN1-201ENST00000252456 FMO2Q99518 471 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 GPR22Q99680 433 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 PCDHB3Q9Y5E6 796 aa13.69□□□□□ -0.22
CNN1-201ENST00000252456 IGKV1-8A0A0C4DH67 115 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 SCRG1O75711 98 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 FAM155BO75949 473 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 FKBP9O95302 570 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 SYF2O95926 243 aaKnown RBP13.68□□□□□ -0.22
CNN1-201ENST00000252456 SAT1P21673 171 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 F8A1P23610 371 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 STX2P32856 288 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 GP5P40197 560 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 GRIA3P42263 894 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 ABHD18Q0P651 414 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 GPS2Q13227 327 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 SBSNQ6UWP8 590 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 C6orf15Q6UXA7 325 aaPredicted RBP13.68□□□□□ -0.22
CNN1-201ENST00000252456 ZNF517Q6ZMY9 492 aaPredicted RBP13.68□□□□□ -0.22
CNN1-201ENST00000252456 CCDC81Q6ZN84 652 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 TMEM126BQ8IUX1 230 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 ANKRD49Q8WVL7 239 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 IFT81Q8WYA0 676 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 SMPDL3AQ92484 453 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 MIPEPQ99797 713 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 ACAT2Q9BWD1 397 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 CAB39LQ9H9S4 337 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 PARVBQ9HBI1 364 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 SLC6A20Q9NP91 592 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 WDR70Q9NW82 654 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 STOX2Q9P2F5 926 aaPredicted RBP13.68□□□□□ -0.22
CNN1-201ENST00000252456 MTRF1LQ9UGC7 380 aaKnown RBP13.68□□□□□ -0.22
CNN1-201ENST00000252456 RALYQ9UKM9 306 aaKnown RBP13.68□□□□□ -0.22
CNN1-201ENST00000252456 PCDHGA4Q9Y5G9 962 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 KALRNO60229 2985 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 SLC16A5O15375 505 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 CTSVO60911 334 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 CPNE3O75131 537 aaKnown RBP13.68□□□□□ -0.22
CNN1-201ENST00000252456 HSD17B2P37059 387 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 ZKSCAN8Q15776 578 aaPredicted RBP13.68□□□□□ -0.22
CNN1-201ENST00000252456 PPP1R3AQ16821 1122 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 ARHGAP40Q5TG30 622 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 FIGLAQ6QHK4 219 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 CTAGE3PQ8IX95 158 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 PPM1NQ8N819 430 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 FUT8Q9BYC5 575 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 CDC42EP4Q9H3Q1 356 aaKnown RBP13.68□□□□□ -0.22
CNN1-201ENST00000252456 FANCEQ9HB96 536 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 POPDC3Q9HBV1 291 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.68□□□□□ -0.22
CNN1-201ENST00000252456 TAC3Q9UHF0 121 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 IL17BQ9UHF5 180 aa13.68□□□□□ -0.22
CNN1-201ENST00000252456 OR2A25A4D2G3 310 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 MAP3K7O43318 606 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 CYP2A7P20853 494 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 RORAP35398 523 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 GCGRP47871 477 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 ITGA1P56199 1179 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 POU4F1Q01851 419 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 ILF2Q12905 390 aaKnown RBP13.67□□□□□ -0.22
CNN1-201ENST00000252456 GPR155Q7Z3F1 870 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 SYTL1Q8IYJ3 562 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 MCOLN3Q8TDD5 553 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 CCDC138Q96M89 665 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 SPRTNQ9H040 489 aaPredicted RBP13.67□□□□□ -0.22
CNN1-201ENST00000252456 SYNPO2LQ9H987 977 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 LHX9Q9NQ69 397 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 EURLQ9NYK6 297 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 TXNDC16Q9P2K2 825 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 NFU1Q9UMS0 254 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 BOD1L1Q8NFC6 3051 aa13.67□□□□□ -0.22
CNN1-201ENST00000252456 HMX2A2RU54 273 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 TARM1B6A8C7 271 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 CDC7O00311 574 aa13.66□□□□□ -0.22
CNN1-201ENST00000252456 PHGDHO43175 533 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms