RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 SRCP12931 536 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 LHCGRP22888 699 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 CD97P48960 835 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 C21orf59P57076 290 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 GABARAPL2P60520 117 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 ISL1P61371 349 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 SPIDRQ14159 915 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 GGTA1PQ4G0N0 100 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 GTF2IRD2BQ6EKJ0 949 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 NEK5Q6P3R8 708 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 ZNF551Q7Z340 670 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-202ENST00000244303 GTF2IRD2Q86UP8 949 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 DCP2Q8IU60 420 aaKnown RBP13.99□□□□□ -0.17
HIF3A-202ENST00000244303 VRK3Q8IV63 474 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 CHPFQ8IZ52 775 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 RAB2BQ8WUD1 216 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 SCRN2Q96FV2 425 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 COX4I2Q96KJ9 171 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 VNN3Q9NY84 501 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 KIAA1522Q9P206 1035 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-202ENST00000244303 BLOC1S6Q9UL45 172 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 WNT9AO14904 365 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 RECQL5O94762 991 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-202ENST00000244303 C1QCP02747 245 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 CKMP06732 381 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 GABRR2P28476 465 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 PSMD7P51665 324 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 ABHD18Q0P651 414 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 DPY19L1Q2PZI1 675 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 PTCHD3Q3KNS1 767 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 LRRC73Q5JTD7 316 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 CDKL4Q5MAI5 379 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 ZNF691Q5VV52 312 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 DOK6Q6PKX4 331 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 ARL10Q8N8L6 244 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 NAT16Q8N8M0 369 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 TESCQ96BS2 214 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 REXO5Q96IC2 774 aaKnown RBP13.99□□□□□ -0.17
HIF3A-202ENST00000244303 MAGED4Q96JG8 741 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 CCDC138Q96M89 665 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 BEGAINQ9BUH8 593 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 SLC12A9Q9BXP2 914 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 DGCR6LQ9BY27 220 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 CRISPLD2Q9H0B8 497 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 CFAP97Q9P2B7 532 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 MAFFQ9ULX9 164 aa13.99□□□□□ -0.17
HIF3A-202ENST00000244303 SLC1A7O00341 560 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 RFXANKO14593 260 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 LILRB3O75022 631 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 BCL10O95999 233 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 CLTBP09497 229 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 HIST1H2AGP0C0S8 130 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-202ENST00000244303 OR56A5P0C7T3 313 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 IL1RNP18510 177 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 HIST1H2ADP20671 130 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 AOAHP28039 575 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 SLC6A12P48065 614 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 PTPN5P54829 565 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 SNRPD1P62314 119 aaKnown RBP13.98□□□□□ -0.17
HIF3A-202ENST00000244303 BOP1Q14137 746 aaKnown RBP13.98□□□□□ -0.17
HIF3A-202ENST00000244303 OR4F3Q6IEY1 312 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 USP45Q70EL2 814 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 GAREM2Q75VX8 874 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 ZDHHC21Q8IVQ6 265 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 HS6ST3Q8IZP7 471 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 RNF175Q8N4F7 328 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 FIBINQ8TAL6 211 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 CMTM7Q96FZ5 175 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 HIST1H2AHQ96KK5 128 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 APOLD1Q96LR9 279 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 HIST1H2AJQ99878 128 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 H2AFJQ9BTM1 129 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 GPN2Q9H9Y4 310 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-202ENST00000244303 TMEM165Q9HC07 324 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 PAK1IP1Q9NWT1 392 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-202ENST00000244303 KLHL42Q9P2K6 505 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 SLC22A14Q9Y267 594 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 PTGES3LE9PB15 166 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 PRAMEF4O60810 478 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 ZNF682O95780 498 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 C8GP07360 202 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 OCM2P0CE71 109 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 OCMP0CE72 109 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-202ENST00000244303 CSF2RAP15509 400 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 PRPH2P23942 346 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 ITGB8P26012 769 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 CA8P35219 290 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 CCR3P51677 355 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 WDR5P61964 334 aaKnown RBP13.98□□□□□ -0.17
HIF3A-202ENST00000244303 MOGQ16653 247 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 MPPE1Q53F39 396 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 PRAMEF9Q5VWM5 478 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 TTC23LQ6PF05 361 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 HIPK1Q86Z02 1210 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 HOMEZQ8IX15 550 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 TCAIMQ8N3R3 496 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 ASB11Q8WXH4 323 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 ECHDC3Q96DC8 303 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 SUV39H2Q9H5I1 410 aa13.98□□□□□ -0.17
HIF3A-202ENST00000244303 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms