RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 MINDY1Q8N5J2 469 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 CAMKK1Q8N5S9 505 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 PACRGLQ8N7B6 248 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 BLOC1S5Q8TDH9 187 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 DDI1Q8WTU0 396 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 LPGAT1Q92604 370 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF597Q96LX8 424 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 GLT1D1Q96MS3 346 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 TMEM175Q9BSA9 504 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 OSBPL11Q9BXB4 747 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 SEZ6LQ9BYH1 1024 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 MRPS26Q9BYN8 205 aaKnown RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 SLC2A11Q9BYW1 496 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 TRIM4Q9C037 500 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 CCDC68Q9H2F9 335 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 C8orf4Q9NR00 106 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 SDR39U1Q9NRG7 319 aaPredicted RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 ARMC1Q9NVT9 282 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 GID8Q9NWU2 228 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 OBP2AQ9NY56 170 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 CCDC167Q9P0B6 97 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 UBA2Q9UBT2 640 aaPredicted RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 PACSIN3Q9UKS6 424 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 POLHQ9Y253 713 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 CRYL1Q9Y2S2 319 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 DNAJC15Q9Y5T4 150 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 TTC3P53804 2025 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 A0A1B0GTL3 188 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 ILVBLA1L0T0 632 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 PRORSD1PA6NEY8 169 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 OR51F1A6NGY5 319 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 MUSKO15146 869 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 KDELR3O43731 214 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 TMEM127O75204 238 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 CLDN11O75508 207 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 RNASEH2AO75792 299 aaKnown RBP7.72□□□□□ -1.17
CXCR4-201ENST00000241393 MLYCDO95822 493 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 TBX18O95935 607 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 ALDH2P05091 517 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 RPS17P08708 135 aaKnown RBP7.72□□□□□ -1.17
CXCR4-201ENST00000241393 FAM58BPP0C7Q3 252 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 PRR35P0CG20 571 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF888P0CJ79 500 aaPredicted RBP7.72□□□□□ -1.17
CXCR4-201ENST00000241393 IDO1P14902 403 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF26P17031 533 aaPredicted RBP7.72□□□□□ -1.17
CXCR4-201ENST00000241393 CR2P20023 1033 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 CCND3P30281 292 aaPredicted RBP7.72□□□□□ -1.17
CXCR4-201ENST00000241393 CLCN4P51793 760 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 ADARP55265 1226 aaKnown RBP7.72□□□□□ -1.17
CXCR4-201ENST00000241393 TXNL4AP83876 142 aaKnown RBP7.72□□□□□ -1.17
CXCR4-201ENST00000241393 RAD51Q06609 339 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 SEMA3AQ14563 771 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 OR4D1Q15615 310 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 MST1LQ2TV78 715 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 CNPY1Q3B7I2 92 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 MGAT5BQ3V5L5 792 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 AARS2Q5JTZ9 985 aaKnown RBP7.72□□□□□ -1.17
CXCR4-201ENST00000241393 ANKS6Q68DC2 871 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 NAIF1Q69YI7 327 aaPredicted RBP7.72□□□□□ -1.17
CXCR4-201ENST00000241393 PPP4R4Q6NUP7 873 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF783Q6ZMS7 281 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 GPR155Q7Z3F1 870 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 LDB1Q86U70 411 aaPredicted RBP7.72□□□□□ -1.17
CXCR4-201ENST00000241393 DHFR2Q86XF0 187 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 FUNDC1Q8IVP5 155 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 LGI2Q8N0V4 545 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 TTC9BQ8N6N2 239 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 PCDH20Q8N6Y1 951 aaKnown RBP7.72□□□□□ -1.17
CXCR4-201ENST00000241393 ANKFN1Q8N957 763 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 PIK3C3Q8NEB9 887 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 OR7D4Q8NG98 312 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 OR52K2Q8NGK3 314 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 TWIST2Q8WVJ9 160 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 C19orf43Q9BQ61 176 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 CINPQ9BW66 212 aaPredicted RBP7.72□□□□□ -1.17
CXCR4-201ENST00000241393 MRPL9Q9BYD2 267 aaKnown RBP7.72□□□□□ -1.17
CXCR4-201ENST00000241393 ARHGAP39Q9C0H5 1083 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 CWH43Q9H720 699 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 MID1IP1Q9NPA3 183 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 TDP1Q9NUW8 608 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 FIS1Q9Y3D6 152 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 ARL5AQ9Y689 179 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 THSD7BQ9C0I4 1608 aa7.72□□□□□ -1.17
CXCR4-201ENST00000241393 VWA8A3KMH1 1905 aa7.71□□□□□ -1.17
CXCR4-201ENST00000241393 ANKRD36A6QL64 1941 aa7.71□□□□□ -1.17
CXCR4-201ENST00000241393 A0A0J9YYE9 177 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 C2orf81A6NN90 581 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 SLC38A8A6NNN8 435 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 H3BNC9 293 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 H7C0S8 307 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 UBXN8O00124 270 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 INSIG1O15503 277 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 NDUFS3O75489 264 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 SOAT2O75908 522 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 RHOBTB1O94844 696 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 CLPTM1O96005 669 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 CHEK2O96017 543 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 SLC4A1P02730 911 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 ALDOCP09972 364 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms