RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 PCDHGA11Q9Y5H2 935 aa23.05■■□□□ 1.28
RRP9-201ENST00000232888 HEBP2Q9Y5Z4 205 aa23.05■■□□□ 1.28
RRP9-201ENST00000232888 NRP2O60462 931 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 PDYNP01213 254 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 IGHV4-34P06331 123 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 ACPPP15309 386 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 THOP1P52888 689 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 MMEL1Q495T6 779 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 LCTLQ6UWM7 567 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 HACD2Q6Y1H2 254 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 SLCO4C1Q6ZQN7 724 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 ABI3BPQ7Z7G0 1075 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 FUNDC1Q8IVP5 155 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 ULK2Q8IYT8 1036 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 FAM9CQ8IZT9 166 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 DSELQ8IZU8 1212 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 PGAM4Q8N0Y7 254 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 PPFIBP2Q8ND30 876 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 METTL2AQ96IZ6 378 aaKnown RBP23.04■■□□□ 1.28
RRP9-201ENST00000232888 EFCAB11Q9BUY7 163 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 RAB11FIP5Q9BXF6 653 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 C6orf106Q9H6K1 298 aaPredicted RBP23.04■■□□□ 1.28
RRP9-201ENST00000232888 FARSBQ9NSD9 589 aaKnown RBP23.04■■□□□ 1.28
RRP9-201ENST00000232888 KCNK6Q9Y257 313 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 TMED5Q9Y3A6 229 aa23.04■■□□□ 1.28
RRP9-201ENST00000232888 C19orf67A6NJJ6 358 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 E7EQ34 232 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 KDM1AO60341 852 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 SLC22A3O75751 556 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 SLC2A4P14672 509 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 LAPTM5Q13571 262 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 SGO1Q5FBB7 561 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 PAGE2BQ5JRK9 111 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 FBXW10Q5XX13 1052 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 ATG9BQ674R7 924 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 BLOC1S3Q6QNY0 202 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 DEFB107AQ8IZN7 70 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 PCYOX1LQ8NBM8 494 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 OR1E3Q8WZA6 343 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 CMTM7Q96FZ5 175 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 C12orf66Q96MD2 445 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 INSM2Q96T92 566 aaPredicted RBP23.03■■□□□ 1.28
RRP9-201ENST00000232888 PCED1AQ9H1Q7 454 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 MRPL40Q9NQ50 206 aaKnown RBP23.03■■□□□ 1.28
RRP9-201ENST00000232888 DOCK9Q9BZ29 2069 aa23.03■■□□□ 1.28
RRP9-201ENST00000232888 A0A088AWK7 358 aa23.02■■□□□ 1.28
RRP9-201ENST00000232888 CIB2O75838 187 aa23.02■■□□□ 1.28
RRP9-201ENST00000232888 CD1EP15812 388 aa23.02■■□□□ 1.28
RRP9-201ENST00000232888 RPL10P27635 214 aaKnown RBP23.02■■□□□ 1.28
RRP9-201ENST00000232888 TMEM31Q5JXX7 168 aa23.02■■□□□ 1.28
RRP9-201ENST00000232888 C6orf163Q5TEZ5 329 aa23.02■■□□□ 1.28
RRP9-201ENST00000232888 SIX5Q8N196 739 aa23.02■■□□□ 1.28
RRP9-201ENST00000232888 SMPDL3AQ92484 453 aa23.02■■□□□ 1.28
RRP9-201ENST00000232888 NEIL2Q969S2 332 aa23.02■■□□□ 1.28
RRP9-201ENST00000232888 SERPINI1Q99574 410 aa23.02■■□□□ 1.28
RRP9-201ENST00000232888 ACPTQ9BZG2 426 aa23.02■■□□□ 1.28
RRP9-201ENST00000232888 BRF2Q9HAW0 419 aa23.02■■□□□ 1.28
RRP9-201ENST00000232888 CIDEBQ9UHD4 219 aa23.02■■□□□ 1.28
RRP9-201ENST00000232888 WDR37Q9Y2I8 494 aa23.02■■□□□ 1.28
RRP9-201ENST00000232888 TDRKHQ9Y2W6 561 aaKnown RBP23.02■■□□□ 1.28
RRP9-201ENST00000232888 C1GALT1C1LP0DN25 315 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 MAPK1P28482 360 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 RFTN2Q52LD8 501 aaPredicted RBP23.01■■□□□ 1.27
RRP9-201ENST00000232888 PRAMEF14Q5SWL7 426 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 CACHD1Q5VU97 1274 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 IL23RQ5VWK5 629 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 PRAMEF13Q5VWM6 474 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 PGM2L1Q6PCE3 622 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 SPEM1Q8N4L4 309 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 OR9I1Q8NGQ6 314 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 WDR20Q8TBZ3 569 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 SLC5A11Q8WWX8 675 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 UBE2E3Q969T4 207 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 CLDN23Q96B33 292 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 ROPN1LQ96C74 230 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 HHIPQ96QV1 700 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 FERD3LQ96RJ6 166 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 HBEGFQ99075 208 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 C1orf50Q9BV19 199 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 CHRDQ9H2X0 955 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 TRNAU1APQ9NX07 287 aaKnown RBP23.01■■□□□ 1.27
RRP9-201ENST00000232888 PCOLCE2Q9UKZ9 415 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.01■■□□□ 1.27
RRP9-201ENST00000232888 FAM234BA2RU67 622 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 H0Y8X5 98 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 SEC22BO75396 215 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 CD22P20273 847 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 KCNK10P57789 538 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 HMGCS1Q01581 520 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 TBL3Q12788 808 aaKnown RBP23.01■■□□□ 1.27
RRP9-201ENST00000232888 RCAN2Q14206 197 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 HIST2H2ACQ16777 129 aaPredicted RBP23.01■■□□□ 1.27
RRP9-201ENST00000232888 REP15Q6BDI9 236 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 HIST2H2AA3Q6FI13 130 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 MED27Q6P2C8 311 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 CYP20A1Q6UW02 462 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 ABRAXAS1Q6UWZ7 409 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 Q6ZSR6 202 aa23.01■■□□□ 1.27
RRP9-201ENST00000232888 NET1Q7Z628 596 aaPredicted RBP23.01■■□□□ 1.27
RRP9-201ENST00000232888 GPR174Q9BXC1 333 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms