RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 PARP14Q460N5 1801 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 MYL12BO14950 172 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 HCRTO43612 131 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 HRGP04196 525 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 MYL12AP19105 171 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 GGT1P19440 569 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 CSTF2P33240 577 aaKnown RBP eCLIP14.3□□□□□ -0.12
PTPRA-201ENST00000216877 TEKQ02763 1124 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 CAPSQ13938 189 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 AANATQ16613 207 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 ZBTB37Q5TC79 503 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 EIF3MQ7L2H7 374 aaKnown RBP14.3□□□□□ -0.12
PTPRA-201ENST00000216877 LUZP2Q86TE4 346 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 FBXO39Q8N4B4 442 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 EFHBQ8N7U6 833 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 ASZ1Q8WWH4 475 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 RGS18Q9NS28 235 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 HRH3Q9Y5N1 445 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 SLX4Q8IY92 1834 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 COL4A5P29400 1685 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 C1QBP02746 253 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 CKMT1AP12532 417 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 UGT2B10P36537 528 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 MFSD13AQ14CX5 517 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 SURF1Q15526 300 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 SUPT20HL1Q3ZLR7 823 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 DGKKQ5KSL6 1271 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 IL27RAQ6UWB1 636 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 SLC46A3Q7Z3Q1 461 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 ABI3BPQ7Z7G0 1075 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 CCDC190Q86UF4 302 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 LINC00518Q8N0U6 118 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 OR52J3Q8NH60 311 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 OLA1Q9NTK5 396 aaKnown RBP14.3□□□□□ -0.12
PTPRA-201ENST00000216877 TMEFF2Q9UIK5 374 aaPredicted RBP14.3□□□□□ -0.12
PTPRA-201ENST00000216877 GPR45Q9Y5Y3 372 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 KLRG2A4D1S0 409 aaPredicted RBP14.3□□□□□ -0.12
PTPRA-201ENST00000216877 MAN2A2P49641 1150 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 DAPP51397 102 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 TPMTP51580 245 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 HERVK_113P63132 956 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 GRIK4Q16099 956 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 LCN1P1Q5VSP4 162 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 ERVK-6Q9BXR3 956 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 MED28Q9H204 178 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 ZNF302Q9NR11 478 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 RAD18Q9NS91 495 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 VNN3Q9NY84 501 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 PPIEQ9UNP9 301 aaKnown RBP14.3□□□□□ -0.12
PTPRA-201ENST00000216877 PCDHGB1Q9Y5G3 927 aa14.3□□□□□ -0.12
PTPRA-201ENST00000216877 LOC285556D6RIA3 1793 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 G6PDP11413 515 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 CYP2B6P20813 491 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 GDI2P50395 445 aaKnown RBP14.29□□□□□ -0.12
PTPRA-201ENST00000216877 RCAN2Q14206 197 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 ANKS6Q68DC2 871 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 AGMOQ6ZNB7 445 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 FAM92BQ6ZTR7 304 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 FAM160B2Q86V87 743 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 IPCEF1Q8WWN9 437 aaPredicted RBP14.29□□□□□ -0.12
PTPRA-201ENST00000216877 WACQ9BTA9 647 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 SMPD4Q9NXE4 827 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 ZMYM5Q9UJ78 669 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 GABRQQ9UN88 632 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 POM121CA8CG34 1229 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 HLA-DPA1P20036 260 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 GPC1P35052 558 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 NOS2P35228 1153 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 MAP2K3P46734 347 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 ELOAQ14241 798 aaKnown RBP14.29□□□□□ -0.12
PTPRA-201ENST00000216877 GBX1Q14549 363 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 TIMM50Q3ZCQ8 353 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 KIAA1614Q5VZ46 1190 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 LPCAT1Q8NF37 534 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 SETD6Q8TBK2 473 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 RAET1EQ8TD07 263 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 HYLS1Q96M11 299 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 OR5M11Q96RB7 305 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 C12orf57Q99622 126 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 MGLLQ99685 303 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 GTPBP2Q9BX10 602 aaKnown RBP14.29□□□□□ -0.12
PTPRA-201ENST00000216877 PCDHB16Q9NRJ7 776 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 LACTBL1A8MY62 500 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 SOCS7O14512 581 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 EEDO75530 441 aaKnown RBP14.29□□□□□ -0.12
PTPRA-201ENST00000216877 CREG1O75629 220 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 RFPL3O75679 317 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 EGFRP00533 1210 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 HOXC6P09630 235 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 SDHBP21912 280 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 AKT1P31749 480 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 NUP62P37198 522 aaPredicted RBP14.29□□□□□ -0.12
PTPRA-201ENST00000216877 BLVRAP53004 296 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 CARD16Q5EG05 197 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 MZT2BQ6NZ67 158 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 XKRXQ6PP77 449 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 C17orf107Q6ZR85 190 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 ASB18Q6ZVZ8 466 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 VN1R5Q7Z5H4 357 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 ADGRD2Q7Z7M1 963 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms