RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 KLHL36Q8N4N3 616 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 OR6K6Q8NGW6 343 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 SMPDL3AQ92484 453 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 TMEM175Q9BSA9 504 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 GKN1Q9NS71 199 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 POFUT2Q9Y2G5 429 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 ZNF536O15090 1300 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 ELOA3DA6NLF2 546 aaPredicted RBP13.25□□□□□ -0.29
SF3A1-201ENST00000215793 TRIM3O75382 744 aaPredicted RBP13.25□□□□□ -0.29
SF3A1-201ENST00000215793 ZNF432O94892 652 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 CD36P16671 472 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 ACVR2AP27037 513 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 ELOA3BQ3SY89 546 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 SLC9A4Q6AI14 798 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 CPNE8Q86YQ8 564 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 FBXO15Q8NCQ5 510 aaPredicted RBP13.25□□□□□ -0.29
SF3A1-201ENST00000215793 ELOA3Q8NG57 546 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 OR2AJ1Q8NGZ0 328 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 PMEPA1Q969W9 287 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 CDK15Q96Q40 435 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 CCM2Q9BSQ5 444 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 IL36AQ9UHA7 158 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 ANKRD66B4E2M5 251 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 TBX10O75333 385 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 ACP5P13686 325 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 AKR1D1P51857 326 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 SCRN3Q0VDG4 424 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 SH3D19Q5HYK7 790 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 OLFML1Q6UWY5 402 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 ABHD13Q7L211 337 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 LRRTM4Q86VH4 590 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 ZFP3Q96NJ6 502 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 CARS2Q9HA77 564 aaKnown RBP13.25□□□□□ -0.29
SF3A1-201ENST00000215793 EBF2Q9HAK2 575 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 GALPQ9UBC7 116 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 OAZ3Q9UMX2 235 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 SCML2Q9UQR0 700 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 SPIN1Q9Y657 262 aaPredicted RBP13.25□□□□□ -0.29
SF3A1-201ENST00000215793 GMEB1Q9Y692 573 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.25□□□□□ -0.29
SF3A1-201ENST00000215793 TGFB1P01137 390 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 AHSGP02765 367 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 LINGO3P0C6S8 592 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 ENGP17813 658 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 TXNL4AP83876 142 aaKnown RBP13.25□□□□□ -0.29
SF3A1-201ENST00000215793 CHRNA6Q15825 494 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 LRRC73Q5JTD7 316 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 OR2T5Q6IEZ7 315 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 ULK3Q6PHR2 472 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 OR8H1Q8NGG4 311 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 OR2T29Q8NH02 315 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 LGR4Q9BXB1 951 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 MOV10Q9HCE1 1003 aaKnown RBP13.25□□□□□ -0.29
SF3A1-201ENST00000215793 TEX264Q9Y6I9 313 aa13.25□□□□□ -0.29
SF3A1-201ENST00000215793 CXorf49A8MYA2 514 aaPredicted RBP13.24□□□□□ -0.29
SF3A1-201ENST00000215793 VLDLRP98155 873 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 ARSIQ5FYB1 569 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 DCAF12L1Q5VU92 463 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 AVL9Q8NBF6 648 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 CAMKVQ8NCB2 501 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 DNAJA4Q8WW22 397 aaPredicted RBP13.24□□□□□ -0.29
SF3A1-201ENST00000215793 OR52B2Q96RD2 323 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 C1orf21Q9H246 121 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 RGS17Q9UGC6 210 aaPredicted RBP13.24□□□□□ -0.29
SF3A1-201ENST00000215793 ERVK-11Q9UQG0 969 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 NFAT5O94916 1531 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 PRAMEF33A0A0G2JMD5 474 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 ITM2AO43736 263 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 AKAP8O43823 692 aaKnown RBP13.24□□□□□ -0.29
SF3A1-201ENST00000215793 PRAMEF10O60809 474 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 XRCC1P18887 633 aaPredicted RBP13.24□□□□□ -0.29
SF3A1-201ENST00000215793 NRG3P56975 720 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 GALNT2Q10471 571 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 SERINC3Q13530 473 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 IQCHQ86VS3 1027 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 SLITRK4Q8IW52 837 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 PRSS58Q8IYP2 241 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 C1orf52Q8N6N3 182 aaKnown RBP13.24□□□□□ -0.29
SF3A1-201ENST00000215793 B3GALT6Q96L58 329 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 CITED4Q96RK1 184 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 GFM1Q96RP9 751 aaKnown RBP13.24□□□□□ -0.29
SF3A1-201ENST00000215793 CTPS2Q9NRF8 586 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 COMMD3Q9UBI1 195 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 HS3ST4Q9Y661 456 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 PRKD3O94806 890 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 H1F0P07305 194 aaKnown RBP13.24□□□□□ -0.29
SF3A1-201ENST00000215793 ATP1B2P14415 290 aaPredicted RBP13.24□□□□□ -0.29
SF3A1-201ENST00000215793 AOC1P19801 751 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 GHRHRQ02643 423 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 SLC18A2Q05940 514 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 CBFBQ13951 182 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 GANABQ14697 944 aaKnown RBP13.24□□□□□ -0.29
SF3A1-201ENST00000215793 FBXO43Q4G163 708 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 IDNKQ5T6J7 187 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 TXNRD3NBQ6F5E7 133 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 ZNF527Q8NB42 609 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 SMG8Q8ND04 991 aaKnown RBP13.24□□□□□ -0.29
SF3A1-201ENST00000215793 GRPEL2Q8TAA5 225 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 KCTD7Q96MP8 289 aa13.24□□□□□ -0.29
SF3A1-201ENST00000215793 PSKH2Q96QS6 385 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms