RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Snx31Q6P8Y7 439 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ubap2lQ80X50 1107 aaKnown RBP9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Zfp438Q8BFX2 798 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Vgll2Q8BGW8 322 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Lmo3Q8BZL8 145 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Kctd2Q8CEZ0 266 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Bloc1s5Q8R015 185 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Asb15Q8VHS6 583 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Krcc1Q99JT5 256 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Q9CZV2 255 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 PgcQ9D7R7 392 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Trim2Q9ESN6 744 aaKnown RBP9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Sec14l5B2RXM5 696 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Magea1O89006 320 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Lman2lP59481 347 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Usf2Q64705 346 aaKnown RBP9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Slitrk5Q810B7 957 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 N4bp2l2Q8JZS6 575 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 GhdcQ99J23 532 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Actr6Q9D864 396 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Magea2Q9R2A2 320 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm12248A0A1W2P8B8 313 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 SelenonD3Z2R5 557 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Chrna4O70174 629 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 DbiP31786 87 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gad2P48320 585 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Polr2cP97760 275 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 InhaQ04997 366 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ntan1Q64311 310 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr664Q7TRP5 306 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Nipal3Q8BGN5 410 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Fam163bQ8BUM6 167 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cyp2d26Q8CIM7 500 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Uckl1Q91YL3 548 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Sh3bp4Q921I6 962 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ssr2Q9CPW5 183 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Dnase1l2Q9D1G0 278 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Aif1lQ9EQX4 150 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tpk1Q9R0M5 243 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Pcdhgb8A0A140LI48 931 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 2010300C02RikE9Q3M9 1175 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Vmn2r19G5E8G4 854 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Entpd1P55772 510 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 CrtamQ149L7 389 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Pag1Q3U1F9 429 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Maml1Q6T264 1020 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rgs7bpQ8BQP9 257 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Mfsd14bQ8CIA9 507 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Snapc5Q8R2K7 98 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rem2Q8VEL9 341 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 F11Q91Y47 624 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tmprss6Q9DBI0 811 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ddx60E9PZQ1 1711 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tmem236A2ARJ3 344 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Atp6ap1lD3Z5W0 336 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ldb1P70662 411 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 SbplQ3TUY3 232 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tmem63bQ3TWI9 832 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Vps51Q3UVL4 782 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Znf354cQ571J5 560 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 AtminQ6P9S1 818 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 HjurpQ6PG16 667 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 TiprlQ8BH58 271 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Zfp719Q8BIV1 735 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 StgQ8BM15 349 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Mon1bQ8BMQ8 553 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Zfp101Q8BP18 612 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Apoa5Q8C7G5 368 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr164Q8VF87 315 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cyp2j9Q924D1 502 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Il20Q9JKV9 176 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm9493F6SVV1 192 aaKnown RBP9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cxcr2P35343 359 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 FcamrQ2TB54 535 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 H2-M3Q31093 336 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Fscn2Q32M02 492 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tmem151bQ68FE7 561 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tor1aip2Q8BYU6 502 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Sntg1Q925E1 517 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Xpr1Q9Z0U0 695 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Arfgef2A2A5R2 1792 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 A0A286YD17 136 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Esp22A8R0V4 111 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Fgf1P61148 155 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Serpine2Q07235 397 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Eml4Q3UMY5 988 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Obox3Q3UT54 335 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Arcn1Q5XJY5 511 aaKnown RBP9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Dpy19l3Q71B07 716 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Fnip2Q80TD3 1108 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Sec24bQ80ZX0 1251 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tmem220Q8BP07 167 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 FggQ8VCM7 436 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr665Q8VG79 316 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr586Q8VH13 317 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr690Q8VH18 315 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Pcdhga6Q91XY2 932 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 OptcQ920A0 328 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Exoc2Q9D4H1 924 aa9.94□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Jph3Q9ET77 744 aa9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms