RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Nipa2Q9JJC8 359 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Msgn1Q9JK54 188 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Hacl1Q9QXE0 581 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ehd1Q9WVK4 534 aaKnown RBP10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Sult2a7A0A1B0GRF0 313 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm13089A2AGW7 455 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 RerglB2RVE2 204 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ccnb1ip1D3Z3K2 276 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Olfr564E9PWA8 316 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Arhgap40E9Q6X9 672 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cdh18E9Q9Q6 790 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Rhox2hK7N6P1 191 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Asna1O54984 348 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 P01664 111 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 H2-D1P14427 368 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 E2f2P56931 443 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Lmf1Q3U3R4 574 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Olfr381Q5SSP0 311 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 HadhQ61425 314 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Runx1t1Q61909 577 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ints6Q6PCM2 883 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Prdx6bQ8BG37 224 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Nuak2Q8BZN4 639 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 4931406P16RikQ8C5X1 1059 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Smco1Q8CEZ1 214 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Sf3b4Q8QZY9 424 aaKnown RBP10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Adgrg3Q8R0T6 542 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Rnf144aQ925F3 292 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Znf639Q99KZ6 485 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cxxc1Q9CWW7 660 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 NarfQ9CYQ7 462 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Klhdc8bQ9D2D9 354 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ubqln5Q9D4I8 510 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Trip4Q9QXN3 581 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Chrna6Q9R0W9 494 aa10.08□□□□□ -0.8
Clip3-201ENSMUST00000014065 Zfp626A0A0U1RQ84 676 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Skint11A7XV14 364 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ptch2O35595 1182 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cd93O89103 644 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Bmp6P20722 510 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cdc25bP30306 576 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cyp2c37P56654 490 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Rps14P62264 151 aaKnown RBP10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 GaaP70699 953 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Wbp2P97765 261 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Rbm15Q0VBL3 962 aaKnown RBP10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 DtlQ3TLR7 729 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Prickle1Q3U5C7 832 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Acsm3Q3UNX5 580 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Sel1l2Q3V172 688 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Sfmbt2Q5DTW2 938 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Adgrd1Q80T32 903 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Suz12Q80U70 741 aaKnown RBP10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ubp1Q811S7 540 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Reep1Q8BGH4 201 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 PgghgQ8BP56 690 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Clec9aQ8BRU4 238 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Guf1Q8C3X4 651 aaKnown RBP10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 SntnQ8C9X1 147 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Tma7Q8K003 64 aaKnown RBP10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Fam83aQ8K2P2 436 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Vmn1r18Q8R2C8 299 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Nudt4Q8R2U6 179 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Rbms2Q8VC70 383 aaKnown RBP10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ptov1Q91VU8 416 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Slc15a4Q91W98 574 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cby3Q9CVN6 235 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Zswim1Q9CWV7 455 aaKnown RBP10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 HephQ9Z0Z4 1157 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm7682A0A0J9YUM1 481 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Esp31A8R0W3 114 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm8897L7N294 181 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm3488M0QW81 238 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Kif1cO35071 1100 aaKnown RBP10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Hmox2O70252 315 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Psma3O70435 255 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cops4O88544 406 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Kcnj9P48543 393 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Copz1P61924 177 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Rps3aP97351 264 aaKnown RBP10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cpne7Q0VE82 557 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ccdc61Q3UJV1 511 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Tapt1Q4VBD2 564 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gpr17Q6NS65 339 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Slc39a10Q6P5F6 833 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Rmnd5aQ80YQ8 391 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Rbbp8Q80YR6 893 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Dnajc27Q8CFP6 273 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 GabrpQ8QZW7 440 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Vmn1r33Q8R2E0 305 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Mtmr14Q8VEL2 648 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Rpl17Q9CPR4 184 aaKnown RBP10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Kat8Q9D1P2 458 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cyp2c55Q9D816 490 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Prokr1Q9JKL1 393 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm43796A0A0J9YV32 372 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm30302A0A1Y7VN40 1110 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm21885A0A286YDN8 145 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cped1B2RX70 1026 aa10.07□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm8922F6XVS9 199 aa10.07□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms