RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 TSPAN6O43657 245 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 PSIP1O75475 530 aaKnown RBP16.6■□□□□ 0.25
PHGDH-211ENST00000641213 CYP17A1P05093 508 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 SRPRAP08240 638 aaKnown RBP16.6■□□□□ 0.25
PHGDH-211ENST00000641213 RAP2AP10114 183 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 JUPP14923 745 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 SDC1P18827 310 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 VASPP50552 380 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-211ENST00000641213 CTSCP53634 463 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 FAM98BQ52LJ0 330 aaKnown RBP16.6■□□□□ 0.25
PHGDH-211ENST00000641213 TMEM240Q5SV17 173 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 LDLRAP1Q5SW96 308 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 FBXO46Q6PJ61 603 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-211ENST00000641213 LIPIQ6XZB0 460 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 CYP2U1Q7Z449 544 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 TNIP2Q8NFZ5 429 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 HCAR2Q8TDS4 363 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 VPS35Q96QK1 796 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 HAUS8Q9BT25 410 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 NTN4Q9HB63 628 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 MAN2B2Q9Y2E5 1009 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 TMED5Q9Y3A6 229 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 PCDHB14Q9Y5E9 798 aa16.6■□□□□ 0.25
PHGDH-211ENST00000641213 QSOX1O00391 747 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 ZNF23P17027 643 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 AMD1P17707 334 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 MAPK1P28482 360 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 S100A3P33764 101 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 RPS9P46781 194 aaKnown RBP16.59■□□□□ 0.25
PHGDH-211ENST00000641213 FPGSQ05932 587 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 KCNC3Q14003 757 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 GRIN2CQ14957 1233 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 TCEAL5Q5H9L2 206 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.59■□□□□ 0.25
PHGDH-211ENST00000641213 LRIF1Q5T3J3 769 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 TBPL2Q6SJ96 375 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 PARS2Q7L3T8 475 aaKnown RBP16.59■□□□□ 0.25
PHGDH-211ENST00000641213 C12orf40Q86WS4 652 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 FAM9CQ8IZT9 166 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 RNF175Q8N4F7 328 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 DNAJB8Q8NHS0 232 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 ZFP28Q8NHY6 868 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 MAGEE2Q8TD90 523 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-211ENST00000641213 GLYATL1Q969I3 302 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 MAGEB10Q96LZ2 347 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-211ENST00000641213 KCNH6Q9H252 994 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 CARS2Q9HA77 564 aaKnown RBP16.59■□□□□ 0.25
PHGDH-211ENST00000641213 CLK4Q9HAZ1 481 aaKnown RBP16.59■□□□□ 0.25
PHGDH-211ENST00000641213 SMPD3Q9NY59 655 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-211ENST00000641213 ADGRE2Q9UHX3 823 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 PPT2Q9UMR5 302 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 INVSQ9Y283 1065 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 LAMA3Q16787 3333 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 CHD7Q9P2D1 2997 aa16.59■□□□□ 0.25
PHGDH-211ENST00000641213 A0A096LPI6 279 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 ELOVL7A1L3X0 281 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 UPK1AO00322 258 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 ERN1O75460 977 aaKnown RBP16.58■□□□□ 0.25
PHGDH-211ENST00000641213 PRSS23O95084 383 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 ASLP04424 464 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 ELFN1P0C7U0 828 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 ADH5P11766 374 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 MAP4P27816 1152 aaKnown RBP16.58■□□□□ 0.25
PHGDH-211ENST00000641213 ROR2Q01974 943 aaKnown RBP16.58■□□□□ 0.25
PHGDH-211ENST00000641213 CHRNB3Q05901 458 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 ACOX1Q15067 660 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 SYTL3Q4VX76 610 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 PHACTR4Q8IZ21 702 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 LILRA3Q8N6C8 439 aaPredicted RBP16.58■□□□□ 0.25
PHGDH-211ENST00000641213 FAM86B1Q8N7N1 296 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 ZNF784Q8NCA9 323 aaPredicted RBP16.58■□□□□ 0.25
PHGDH-211ENST00000641213 CYGBQ8WWM9 190 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 FOXJ1Q92949 421 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 TMEM159Q96B96 161 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 TESCQ96BS2 214 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 AP2M1Q96CW1 435 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 NMD3Q96D46 503 aaKnown RBP16.58■□□□□ 0.25
PHGDH-211ENST00000641213 APOLD1Q96LR9 279 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 TBCDQ9BTW9 1192 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 KAT8Q9H7Z6 458 aaKnown RBP16.58■□□□□ 0.25
PHGDH-211ENST00000641213 ITM2BQ9Y287 266 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 AP3M1Q9Y2T2 418 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 PCM1Q15154 2024 aa16.58■□□□□ 0.25
PHGDH-211ENST00000641213 ATG13O75143 517 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 DEAF1O75398 565 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-211ENST00000641213 HOXB9P17482 250 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-211ENST00000641213 CD22P20273 847 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 PREPP48147 710 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 PRLHRP49683 370 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 IRF8Q02556 426 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 TMEM115Q12893 351 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-211ENST00000641213 PGS1Q32NB8 556 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 CYBRD1Q53TN4 286 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 LIPJQ5W064 366 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 ATG9BQ674R7 924 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 NAIF1Q69YI7 327 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-211ENST00000641213 ERAP2Q6P179 960 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 ENPP6Q6UWR7 440 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 GCNT7Q6ZNI0 430 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 THOC6Q86W42 341 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms