RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 STMND1H3BQB6 276 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 SPAG6O75602 509 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 STK17BO94768 372 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 SLC16A8O95907 504 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 GP5P40197 560 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 RGS4P49798 205 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 IL2P60568 153 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 TUBB4BP68371 445 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 ACY1Q03154 408 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 PDAP1Q13442 181 aaKnown RBP25.73■■□□□ 1.71
VEGFA-231ENST00000640499 PHKG1Q16816 387 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.73■■□□□ 1.712e-8■■□□□ 12.5
VEGFA-231ENST00000640499 KIAA1614Q5VZ46 1190 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 PWWP2BQ6NUJ5 590 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 LRRC69Q6ZNQ3 347 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 C19orf47Q8N9M1 422 aaKnown RBP25.73■■□□□ 1.71
VEGFA-231ENST00000640499 ZNF480Q8WV37 535 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 ANKRD49Q8WVL7 239 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 PDLIM5Q96HC4 596 aaKnown RBP25.73■■□□□ 1.71
VEGFA-231ENST00000640499 SLC12A9Q9BXP2 914 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 CDC42EP4Q9H3Q1 356 aaKnown RBP25.73■■□□□ 1.71
VEGFA-231ENST00000640499 CAB39LQ9H9S4 337 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 NFU1Q9UMS0 254 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 PCDHB11Q9Y5F2 797 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 CACNA1BQ00975 2339 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 PCM1Q15154 2024 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 CTSBP07858 339 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 MSL3P1P0C860 447 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 ZNF37AP17032 561 aaPredicted RBP25.72■■□□□ 1.71
VEGFA-231ENST00000640499 STX2P32856 288 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 ZXDCQ2QGD7 858 aaPredicted RBP25.72■■□□□ 1.71
VEGFA-231ENST00000640499 PRAMEF17Q5VTA0 474 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 FCRL6Q6DN72 434 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 LRRC8EQ6NSJ5 796 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 PPP1R3BQ86XI6 285 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 CTAGE3PQ8IX95 158 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 DNAJC22Q8N4W6 341 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 PPFIBP2Q8ND30 876 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 GPR22Q99680 433 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 FUT8Q9BYC5 575 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 CHRNA10Q9GZZ6 450 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 PDE7BQ9NP56 450 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 LNPEPQ9UIQ6 1025 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 RARRES3Q9UL19 164 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 PTPRQQ9UMZ3 2332 aa25.72■■□□□ 1.71
VEGFA-231ENST00000640499 H3BMH7 237 aa25.71■■□□□ 1.71
VEGFA-231ENST00000640499 ZBTB14O43829 449 aa25.71■■□□□ 1.71
VEGFA-231ENST00000640499 WT1P19544 449 aaPredicted RBP25.71■■□□□ 1.71
VEGFA-231ENST00000640499 MAGP20916 626 aa25.71■■□□□ 1.71
VEGFA-231ENST00000640499 OAS2P29728 719 aaKnown RBP25.71■■□□□ 1.71
VEGFA-231ENST00000640499 PNLIPRP1P54315 467 aa25.71■■□□□ 1.71
VEGFA-231ENST00000640499 ARHGAP19Q14CB8 494 aa25.71■■□□□ 1.71
VEGFA-231ENST00000640499 COL28A1Q2UY09 1125 aa25.71■■□□□ 1.71
VEGFA-231ENST00000640499 TMTC4Q5T4D3 741 aa25.71■■□□□ 1.71
VEGFA-231ENST00000640499 SUSD1Q6UWL2 747 aa25.71■■□□□ 1.71
VEGFA-231ENST00000640499 MBOAT1Q6ZNC8 495 aa25.71■■□□□ 1.71
VEGFA-231ENST00000640499 MYO1HQ8N1T3 1032 aa25.71■■□□□ 1.71
VEGFA-231ENST00000640499 OR1L3Q8NH93 324 aa25.71■■□□□ 1.71
VEGFA-231ENST00000640499 TCTN2Q96GX1 697 aa25.71■■□□□ 1.71
VEGFA-231ENST00000640499 ANKRD12Q6UB98 2062 aa25.71■■□□□ 1.71
VEGFA-231ENST00000640499 E7ENX8 843 aa25.7■■□□□ 1.7
VEGFA-231ENST00000640499 SLC16A5O15375 505 aa25.7■■□□□ 1.7
VEGFA-231ENST00000640499 KRT37O76014 449 aa25.7■■□□□ 1.7
VEGFA-231ENST00000640499 KIAA0754O94854 1291 aa25.7■■□□□ 1.7
VEGFA-231ENST00000640499 C8GP07360 202 aa25.7■■□□□ 1.7
VEGFA-231ENST00000640499 IMPA1P29218 277 aa25.7■■□□□ 1.7
VEGFA-231ENST00000640499 POU4F1Q01851 419 aa25.7■■□□□ 1.7
VEGFA-231ENST00000640499 TAP2Q03519 686 aa25.7■■□□□ 1.7
VEGFA-231ENST00000640499 SF1Q15637 639 aaKnown RBP25.7■■□□□ 1.7
VEGFA-231ENST00000640499 GRTP1Q5TC63 336 aa25.7■■□□□ 1.7
VEGFA-231ENST00000640499 VASH2Q86V25 355 aa25.7■■□□□ 1.7
VEGFA-231ENST00000640499 BPHLQ86WA6 291 aaPredicted RBP25.7■■□□□ 1.7
VEGFA-231ENST00000640499 IFT20Q8IY31 132 aa25.7■■□□□ 1.7
VEGFA-231ENST00000640499 SLC22A18Q96BI1 424 aa25.7■■□□□ 1.7
VEGFA-231ENST00000640499 MIPEPQ99797 713 aa25.7■■□□□ 1.7
VEGFA-231ENST00000640499 PARVBQ9HBI1 364 aa25.7■■□□□ 1.7
VEGFA-231ENST00000640499 HMX2A2RU54 273 aa25.69■■□□□ 1.7
VEGFA-231ENST00000640499 NRP2O60462 931 aa25.69■■□□□ 1.7
VEGFA-231ENST00000640499 RAD1O60671 282 aa25.69■■□□□ 1.7
VEGFA-231ENST00000640499 SYF2O95926 243 aaKnown RBP25.69■■□□□ 1.7
VEGFA-231ENST00000640499 MAP4P27816 1152 aaKnown RBP25.69■■□□□ 1.7
VEGFA-231ENST00000640499 GRIA3P42263 894 aa25.69■■□□□ 1.7
VEGFA-231ENST00000640499 SP140Q13342 867 aa25.69■■□□□ 1.7
VEGFA-231ENST00000640499 RAB42Q8N4Z0 105 aa25.69■■□□□ 1.7
VEGFA-231ENST00000640499 SLC38A9Q8NBW4 561 aa25.69■■□□□ 1.7
VEGFA-231ENST00000640499 OR2L3Q8NG85 312 aa25.69■■□□□ 1.7
VEGFA-231ENST00000640499 SMPDL3AQ92484 453 aa25.69■■□□□ 1.7
VEGFA-231ENST00000640499 FCRL4Q96PJ5 515 aa25.69■■□□□ 1.7
VEGFA-231ENST00000640499 ULBP3Q9BZM4 244 aa25.69■■□□□ 1.7
VEGFA-231ENST00000640499 TSPYL1Q9H0U9 437 aa25.69■■□□□ 1.7
VEGFA-231ENST00000640499 STOX2Q9P2F5 926 aaPredicted RBP25.69■■□□□ 1.7
VEGFA-231ENST00000640499 KLK4Q9Y5K2 254 aa25.69■■□□□ 1.7
VEGFA-231ENST00000640499 FAM153BP0C7A2 387 aa25.68■■□□□ 1.7
VEGFA-231ENST00000640499 GMPRP36959 345 aa25.68■■□□□ 1.7
VEGFA-231ENST00000640499 ZKSCAN8Q15776 578 aaPredicted RBP25.68■■□□□ 1.7
VEGFA-231ENST00000640499 DEFB110Q30KQ9 67 aa25.68■■□□□ 1.7
VEGFA-231ENST00000640499 FAM153CQ494X1 144 aa25.68■■□□□ 1.7
VEGFA-231ENST00000640499 FIGLAQ6QHK4 219 aa25.68■■□□□ 1.7
VEGFA-231ENST00000640499 SBSNQ6UWP8 590 aa25.68■■□□□ 1.7
VEGFA-231ENST00000640499 GALNT6Q8NCL4 622 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms