RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 TRIM55Q9BYV6 548 aa24.24■■□□□ 1.47
VEGFA-230ENST00000640482 ING2Q9H160 280 aa24.24■■□□□ 1.47
VEGFA-230ENST00000640482 CCDC68Q9H2F9 335 aa24.24■■□□□ 1.47
VEGFA-230ENST00000640482 ZCWPW2A0A1B0GU75 182 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 ZNF185O15231 689 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 PRICKLE3O43900 615 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-230ENST00000640482 DNAJB5O75953 348 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 MATN4O95460 622 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 CTSBP07858 339 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 TCP1P17987 556 aaKnown RBP24.23■■□□□ 1.47
VEGFA-230ENST00000640482 PTGIRP43119 386 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 LONRF1Q17RB8 773 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 TTLL9Q3SXZ7 439 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 CCSMST1Q4G0I0 132 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 MLIPQ5VWP3 458 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 CPZQ66K79 652 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 ASB18Q6ZVZ8 466 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 RAB43Q86YS6 212 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 CALML6Q8TD86 181 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 DENND1AQ8TEH3 1009 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 ZUFSPQ96AP4 578 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 GBP5Q96PP8 586 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 EPN3Q9H201 632 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 C20orf96Q9NUD7 363 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-230ENST00000640482 IFT80Q9P2H3 777 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-230ENST00000640482 DHCR7Q9UBM7 475 aaKnown RBP24.23■■□□□ 1.47
VEGFA-230ENST00000640482 NDOR1Q9UHB4 597 aa24.23■■□□□ 1.47
VEGFA-230ENST00000640482 NR1D1P20393 614 aa24.22■■□□□ 1.47
VEGFA-230ENST00000640482 ARSFP54793 590 aa24.22■■□□□ 1.47
VEGFA-230ENST00000640482 ACSBG2Q5FVE4 666 aa24.22■■□□□ 1.47
VEGFA-230ENST00000640482 FAM69BQ5VUD6 431 aa24.22■■□□□ 1.47
VEGFA-230ENST00000640482 FCRL6Q6DN72 434 aa24.22■■□□□ 1.47
VEGFA-230ENST00000640482 DENND6AQ8IWF6 608 aa24.22■■□□□ 1.47
VEGFA-230ENST00000640482 TEX19Q8NA77 164 aa24.22■■□□□ 1.47
VEGFA-230ENST00000640482 ANP32BQ92688 251 aaKnown RBP24.22■■□□□ 1.47
VEGFA-230ENST00000640482 SIGLEC10Q96LC7 697 aa24.22■■□□□ 1.47
VEGFA-230ENST00000640482 FBXO6Q9NRD1 293 aaPredicted RBP24.22■■□□□ 1.47
VEGFA-230ENST00000640482 FAM114A2Q9NRY5 505 aa24.22■■□□□ 1.47
VEGFA-230ENST00000640482 KLHL42Q9P2K6 505 aa24.22■■□□□ 1.47
VEGFA-230ENST00000640482 GALPQ9UBC7 116 aa24.22■■□□□ 1.47
VEGFA-230ENST00000640482 ASIC3Q9UHC3 531 aa24.22■■□□□ 1.47
VEGFA-230ENST00000640482 TLN1Q9Y490 2541 aaKnown RBP24.21■■□□□ 1.47
VEGFA-230ENST00000640482 TARM1B6A8C7 271 aa24.21■■□□□ 1.47
VEGFA-230ENST00000640482 K7EM74 188 aa24.21■■□□□ 1.47
VEGFA-230ENST00000640482 CCL11P51671 97 aa24.21■■□□□ 1.47
VEGFA-230ENST00000640482 CHAF1BQ13112 559 aa24.21■■□□□ 1.47
VEGFA-230ENST00000640482 CTBP1Q13363 440 aa24.21■■□□□ 1.47
VEGFA-230ENST00000640482 CYP2A13Q16696 494 aa24.21■■□□□ 1.47
VEGFA-230ENST00000640482 KLHL38Q2WGJ6 581 aa24.21■■□□□ 1.47
VEGFA-230ENST00000640482 TCTE1Q5JU00 501 aa24.21■■□□□ 1.47
VEGFA-230ENST00000640482 RNASEH2BQ5TBB1 312 aaKnown RBP24.21■■□□□ 1.47
VEGFA-230ENST00000640482 PCGF5Q86SE9 256 aa24.21■■□□□ 1.47
VEGFA-230ENST00000640482 OR9A1PQ8NGU1 263 aa24.21■■□□□ 1.47
VEGFA-230ENST00000640482 SLC25A23Q9BV35 468 aa24.21■■□□□ 1.47
VEGFA-230ENST00000640482 COMMD10Q9Y6G5 202 aa24.21■■□□□ 1.47
VEGFA-230ENST00000640482 SPTBP11277 2137 aa24.2■■□□□ 1.47
VEGFA-230ENST00000640482 CATP04040 527 aaKnown RBP24.2■■□□□ 1.46
VEGFA-230ENST00000640482 SLC1A2P43004 574 aa24.2■■□□□ 1.46
VEGFA-230ENST00000640482 CLCN7P51798 805 aa24.2■■□□□ 1.46
VEGFA-230ENST00000640482 NAA25Q14CX7 972 aa24.2■■□□□ 1.46
VEGFA-230ENST00000640482 NKAIN1Q4KMZ8 207 aa24.2■■□□□ 1.46
VEGFA-230ENST00000640482 NEK10Q6ZWH5 1172 aa24.2■■□□□ 1.46
VEGFA-230ENST00000640482 MED25Q71SY5 747 aa24.2■■□□□ 1.46
VEGFA-230ENST00000640482 AGGF1Q8N302 714 aaeCLIP24.2■■□□□ 1.46
VEGFA-230ENST00000640482 TMEM102Q8N9M5 508 aaPredicted RBP24.2■■□□□ 1.46
VEGFA-230ENST00000640482 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.2■■□□□ 1.466e-6■■■■■ 47.7
VEGFA-230ENST00000640482 KCNJ9Q92806 393 aa24.2■■□□□ 1.46
VEGFA-230ENST00000640482 IP6K3Q96PC2 410 aa24.2■■□□□ 1.46
VEGFA-230ENST00000640482 MIPEPQ99797 713 aa24.2■■□□□ 1.46
VEGFA-230ENST00000640482 SELENOSQ9BQE4 189 aa24.2■■□□□ 1.46
VEGFA-230ENST00000640482 DDX47Q9H0S4 455 aaKnown RBP24.2■■□□□ 1.46
VEGFA-230ENST00000640482 G3BP2Q9UN86 482 aaKnown RBP24.2■■□□□ 1.46
VEGFA-230ENST00000640482 PCDHGA9Q9Y5G4 932 aaKnown RBP24.2■■□□□ 1.46
VEGFA-230ENST00000640482 KLK4Q9Y5K2 254 aa24.2■■□□□ 1.46
VEGFA-230ENST00000640482 FAM169AQ9Y6X4 670 aa24.2■■□□□ 1.46
VEGFA-230ENST00000640482 KRT87PA6NCN2 255 aa24.19■■□□□ 1.46
VEGFA-230ENST00000640482 DNALI1O14645 258 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-230ENST00000640482 PSIP1O75475 530 aaKnown RBP24.19■■□□□ 1.46
VEGFA-230ENST00000640482 KLF7O75840 302 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-230ENST00000640482 ALAS2P22557 587 aa24.19■■□□□ 1.46
VEGFA-230ENST00000640482 PSMB5P28074 263 aa24.19■■□□□ 1.46
VEGFA-230ENST00000640482 FOLR3P41439 243 aa24.19■■□□□ 1.46
VEGFA-230ENST00000640482 GRIA3P42263 894 aa24.19■■□□□ 1.46
VEGFA-230ENST00000640482 PGDP52209 483 aa24.19■■□□□ 1.46
VEGFA-230ENST00000640482 RRADP55042 308 aa24.19■■□□□ 1.46
VEGFA-230ENST00000640482 PTK6Q13882 451 aa24.19■■□□□ 1.46
VEGFA-230ENST00000640482 SSPNQ14714 243 aa24.19■■□□□ 1.46
VEGFA-230ENST00000640482 YOD1Q5VVQ6 348 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-230ENST00000640482 TTC29Q8NA56 475 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-230ENST00000640482 OR2L3Q8NG85 312 aa24.19■■□□□ 1.46
VEGFA-230ENST00000640482 GABPB2Q8TAK5 448 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-230ENST00000640482 SLCO2A1Q92959 643 aa24.19■■□□□ 1.46
VEGFA-230ENST00000640482 FAM167BQ9BTA0 163 aa24.19■■□□□ 1.46
VEGFA-230ENST00000640482 PCYOX1Q9UHG3 505 aa24.19■■□□□ 1.46
VEGFA-230ENST00000640482 PTRH2Q9Y3E5 179 aaKnown RBP24.19■■□□□ 1.46
VEGFA-230ENST00000640482 SPTA1P02549 2419 aa24.19■■□□□ 1.46
VEGFA-230ENST00000640482 ARHGEF33A8MVX0 844 aa24.18■■□□□ 1.46
VEGFA-230ENST00000640482 ATXN8OSP0DMR3 200 aa24.18■■□□□ 1.46
VEGFA-230ENST00000640482 PIM1P11309 404 aaPredicted RBP24.18■■□□□ 1.46
VEGFA-230ENST00000640482 PGAM1P18669 254 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms