RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 KLHL23Q8NBE8 558 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 RPL3LQ92901 407 aaKnown RBP14.23□□□□□ -0.13
SCARB2-221ENST00000640341 MAGED4Q96JG8 741 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 RUBCNLQ9H714 662 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 MTRRQ9UBK8 725 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 CLEC4EQ9ULY5 219 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 EVPLLA8MZ36 301 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 SCELO95171 688 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 CDK5R2Q13319 367 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 SYT16Q17RD7 645 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 RGMBQ6NW40 437 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 CERS6Q6ZMG9 384 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 AHSA2Q719I0 299 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 SNX20Q7Z614 316 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 PIH1D2Q8WWB5 315 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 TAMM41Q96BW9 452 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 PYURFQ96I23 114 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 CLMPQ9H6B4 373 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 SAMHD1Q9Y3Z3 626 aaKnown RBP14.23□□□□□ -0.13
SCARB2-221ENST00000640341 PIKFYVEQ9Y2I7 2098 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 ZNF99A8MXY4 864 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 HIST1H2AGP0C0S8 130 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 HIST1H2ADP20671 130 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 BCAP31P51572 246 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 ILF2Q12905 390 aaKnown RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 PTCHD3Q3KNS1 767 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 GTF2IRD2BQ6EKJ0 949 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 Q6ZPB1 254 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 GTF2IRD2Q86UP8 949 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 HIST1H2AHQ96KK5 128 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 FAM210AQ96ND0 272 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 CASD1Q96PB1 797 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 HIST1H2AJQ99878 128 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 H2AFJQ9BTM1 129 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 ABT1Q9ULW3 272 aaKnown RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 PATJQ8NI35 1801 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 H7C4K7 107 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 FAM20BO75063 409 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 RPLP2P05387 115 aaKnown RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 INHBBP09529 407 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 ZNF12P17014 697 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 GJA1P17302 382 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 ACRV1P26436 265 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 EIF2B2P49770 351 aaKnown RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 CCL23P55773 120 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 GRSF1Q12849 480 aaKnown RBP eCLIP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 POM121L1PQ3SYA9 428 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 PDE12Q6L8Q7 609 aaKnown RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 CLECL1Q8IZS7 167 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 ZCCHC7Q8N3Z6 543 aaKnown RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 AADATQ8N5Z0 425 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 BEND7Q8N7W2 519 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 GPR26Q8NDV2 337 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 RNF186Q9NXI6 227 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 PAIP2BQ9ULR5 123 aaKnown RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 C5orf42Q9H799 3197 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 NPIPB15A6NHN6 443 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 GAPDHSO14556 408 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 RECQL5O94762 991 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 MAGEA10P43363 369 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 TUFMP49411 452 aaKnown RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 CYP27C1Q4G0S4 372 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 USP39Q53GS9 565 aaKnown RBP14.22□□□□□ -0.13
SCARB2-221ENST00000640341 SYT12Q8IV01 421 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 SVOPLQ8N434 492 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 FOXJ1Q92949 421 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 RMND5AQ9H871 391 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 AASDHPPTQ9NRN7 309 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 PPT2Q9UMR5 302 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 TRPM7Q96QT4 1865 aa14.22□□□□□ -0.13
SCARB2-221ENST00000640341 TMEM88BA6NKF7 163 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 CLDN25C9JDP6 229 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 CKMP06732 381 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 TTLL9Q3SXZ7 439 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 SLC16A12Q6ZSM3 486 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 OR52J3Q8NH60 311 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 MAL2Q969L2 176 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 MED8Q96G25 268 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 REXO5Q96IC2 774 aaKnown RBP14.21□□□□□ -0.13
SCARB2-221ENST00000640341 REXO4Q9GZR2 422 aaKnown RBP14.21□□□□□ -0.13
SCARB2-221ENST00000640341 MAGEE1Q9HCI5 957 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 TMEFF2Q9UIK5 374 aaPredicted RBP14.21□□□□□ -0.13
SCARB2-221ENST00000640341 ERGIC3Q9Y282 383 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 TET1Q8NFU7 2136 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 TNFRSF1BP20333 461 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 DGKEP52429 567 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 CYP4F2P78329 520 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 ATP13A5Q4VNC0 1218 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 ZNF648Q5T619 568 aaPredicted RBP14.21□□□□□ -0.13
SCARB2-221ENST00000640341 GPR153Q6NV75 609 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 GPR156Q8NFN8 814 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 TRUB1Q8WWH5 349 aaKnown RBP14.21□□□□□ -0.13
SCARB2-221ENST00000640341 SH3YL1Q96HL8 342 aaPredicted RBP14.21□□□□□ -0.13
SCARB2-221ENST00000640341 CPQQ9Y646 472 aa14.21□□□□□ -0.13
SCARB2-221ENST00000640341 TANC1Q9C0D5 1861 aa14.21□□□□□ -0.14
SCARB2-221ENST00000640341 TRBC1P01850 177 aa14.21□□□□□ -0.14
SCARB2-221ENST00000640341 MT-ND2P03891 347 aa14.21□□□□□ -0.14
SCARB2-221ENST00000640341 OPN1SWP03999 348 aa14.21□□□□□ -0.14
SCARB2-221ENST00000640341 EBLN1P0CF75 366 aa14.21□□□□□ -0.14
SCARB2-221ENST00000640341 COX7A2P14406 83 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms