RNA–Protein interactions for RNA: ENST00000639956.1

SPIN3-232, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-232ENST00000639956 EMX1Q04741 257 aaPredicted RBP12.15□□□□□ -0.46
SPIN3-232ENST00000639956 USP39Q53GS9 565 aaKnown RBP12.15□□□□□ -0.46
SPIN3-232ENST00000639956 LRRC66Q68CR7 880 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 PDE12Q6L8Q7 609 aaKnown RBP12.15□□□□□ -0.46
SPIN3-232ENST00000639956 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
SPIN3-232ENST00000639956 SNX20Q7Z614 316 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 ADHFE1Q8IWW8 467 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 ATG16L2Q8NAA4 619 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 GPR156Q8NFN8 814 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 ZFP90Q8TF47 636 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 PANX1Q96RD7 426 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 RBM4BQ9BQ04 359 aaKnown RBP12.15□□□□□ -0.46
SPIN3-232ENST00000639956 CLSTN3Q9BQT9 956 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 RBM4Q9BWF3 364 aaKnown RBP12.15□□□□□ -0.46
SPIN3-232ENST00000639956 VN1R3Q9BXE9 311 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 PDP1Q9P0J1 537 aaPredicted RBP12.15□□□□□ -0.46
SPIN3-232ENST00000639956 DAPK2Q9UIK4 370 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 CDH7Q9ULB5 785 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.15□□□□□ -0.46
SPIN3-232ENST00000639956 ORC6Q9Y5N6 252 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 FUOMA2VDF0 154 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 C16orf96A6NNT2 1141 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 M0R129 80 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 CLPXO76031 633 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 CPNE6O95741 557 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 ANXA5P08758 320 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 EPORP19235 508 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 TPP2P29144 1249 aaPredicted RBP12.15□□□□□ -0.46
SPIN3-232ENST00000639956 TTKP33981 857 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 ISL1P61371 349 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 SKIV2LQ15477 1246 aaKnown RBP12.15□□□□□ -0.46
SPIN3-232ENST00000639956 SYT16Q17RD7 645 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 FAM26DQ5JW98 314 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 DGKKQ5KSL6 1271 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 DNAJB7Q7Z6W7 309 aaPredicted RBP12.15□□□□□ -0.46
SPIN3-232ENST00000639956 OR52J3Q8NH60 311 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 MIR1-1HGQ9H1L0 117 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 CLMPQ9H6B4 373 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 ZDHHC6Q9H6R6 413 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 DCAF13Q9NV06 445 aaKnown RBP12.15□□□□□ -0.46
SPIN3-232ENST00000639956 C3orf18Q9UK00 162 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 PCDHB1Q9Y5F3 818 aa12.15□□□□□ -0.46
SPIN3-232ENST00000639956 H7C4K7 107 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 PRAMEF4O60810 478 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 NDUFS2O75306 463 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 TRBC1P01850 177 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 UGT2B4P06133 528 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 SDC1P18827 310 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 ABRQ12979 859 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 CDK5R2Q13319 367 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 COL9A2Q14055 689 aaPredicted RBP12.15□□□□□ -0.47
SPIN3-232ENST00000639956 PRAMEF9Q5VWM5 478 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 NEK5Q6P3R8 708 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 ZNF540Q8NDQ6 660 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 MED8Q96G25 268 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 DOK1Q99704 481 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 REXO4Q9GZR2 422 aaKnown RBP12.15□□□□□ -0.47
SPIN3-232ENST00000639956 TMEFF2Q9UIK5 374 aaPredicted RBP12.15□□□□□ -0.47
SPIN3-232ENST00000639956 ERVK-11Q9UQG0 969 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 ZNF510Q9Y2H8 683 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 YIPF1Q9Y548 306 aa12.15□□□□□ -0.47
SPIN3-232ENST00000639956 COL4A4P53420 1690 aaPredicted RBP12.15□□□□□ -0.47
SPIN3-232ENST00000639956 SLC28A1O00337 649 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 FZD6O60353 706 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 IL6P05231 212 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 WEE1P30291 646 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 TUFMP49411 452 aaKnown RBP12.14□□□□□ -0.47
SPIN3-232ENST00000639956 VLDLRP98155 873 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 NPTX1Q15818 432 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 MOGQ16653 247 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 TRIM16LQ309B1 348 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 GPRC6AQ5T6X5 926 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 GTF2IRD2BQ6EKJ0 949 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 AHSA2Q719I0 299 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 GTF2IRD2Q86UP8 949 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 CMTM8Q8IZV2 173 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 LILRA3Q8N6C8 439 aaPredicted RBP12.14□□□□□ -0.47
SPIN3-232ENST00000639956 ST13P5Q8NFI4 369 aaPredicted RBP12.14□□□□□ -0.47
SPIN3-232ENST00000639956 RAB2BQ8WUD1 216 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 PYURFQ96I23 114 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 KLF16Q9BXK1 252 aaPredicted RBP12.14□□□□□ -0.47
SPIN3-232ENST00000639956 GORASP2Q9H8Y8 452 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 ZNF334Q9HCZ1 680 aaPredicted RBP12.14□□□□□ -0.47
SPIN3-232ENST00000639956 SERHLQ9NQF3 203 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 KIF17Q9P2E2 1029 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 GMEB1Q9Y692 573 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 M0R3G1 203 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 NRG2O14511 850 aaPredicted RBP12.14□□□□□ -0.47
SPIN3-232ENST00000639956 CA12O43570 354 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 NADKO95544 446 aaPredicted RBP12.14□□□□□ -0.47
SPIN3-232ENST00000639956 KRT6AP02538 564 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 KRT6BP04259 564 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 INHBBP09529 407 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 C7P10643 843 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 ENGP17813 658 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 PBLDP30039 288 aaPredicted RBP12.14□□□□□ -0.47
SPIN3-232ENST00000639956 KRT6CP48668 564 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 CBX3Q13185 183 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
SPIN3-232ENST00000639956 PRR23BQ6ZRT6 265 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms