RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ANTXR2P58335 489 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 DAOAP59103 153 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ROR2Q01974 943 aaKnown RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 TLE1Q04724 770 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 SCRN3Q0VDG4 424 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 BST1Q10588 318 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 TROAPQ12815 778 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 STX5Q13190 355 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ENPP2Q13822 863 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 TMEM132BQ14DG7 1078 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 PDK3Q15120 406 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 PTPRRQ15256 657 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 SLC5A12Q1EHB4 618 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 P3H1Q32P28 736 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CDONQ4KMG0 1287 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 LRRC24Q50LG9 513 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 PDCD4Q53EL6 469 aaKnown RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 PDLIM3Q53GG5 364 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 EOGTQ5NDL2 527 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CEP85LQ5SZL2 805 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 MARCH8Q5T0T0 291 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ARHGAP40Q5TG30 622 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 KRT79Q5XKE5 535 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 BTBD8Q5XKL5 378 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 NCR3LG1Q68D85 454 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 MBLAC2Q68D91 279 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 SNRNP48Q6IEG0 339 aaKnown RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 RGS7BPQ6MZT1 257 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 DENND1BQ6P3S1 775 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 TTC33Q6PID6 262 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 FBXO46Q6PJ61 603 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 TMIGD1Q6UXZ0 262 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 Q6ZPA2 131 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 RTL4Q6ZR62 310 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 GPRIN3Q6ZVF9 776 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 KCTD8Q6ZWB6 473 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 PAGE2Q7Z2X7 111 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 PRSS42Q7Z5A4 293 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ABI3BPQ7Z7G0 1075 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CENPVQ7Z7K6 275 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 AACSQ86V21 672 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 VRK2Q86Y07 508 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ECHDC2Q86YB7 292 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CCDC50Q8IVM0 306 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CCDC60Q8IWA6 550 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 FAM126BQ8IXS8 530 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 TIGD4Q8IY51 512 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CENPLQ8N0S6 344 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 IQCKQ8N0W5 287 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 UBE2J2Q8N2K1 259 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 KLHL36Q8N4N3 616 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ANKRD13CQ8N6S4 541 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 FAM86B1Q8N7N1 296 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CEP112Q8N8E3 955 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 MLKLQ8NB16 471 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CLEC1AQ8NC01 280 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ZNF248Q8NDW4 579 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 OR4K14Q8NGD5 310 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 OR9K2Q8NGE7 335 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 OR52B4Q8NGK2 314 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 OR13F1Q8NGS4 319 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 OR10Z1Q8NGY1 313 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 IL17DQ8TAD2 202 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 OCC1Q8TAD7 63 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ADAMTS16Q8TE57 1224 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 GLYATL2Q8WU03 294 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 TOP1MTQ969P6 601 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 MRGPRFQ96AM1 343 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CIDECQ96AQ7 238 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 MCUR1Q96AQ8 359 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 OTUB2Q96DC9 234 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ERLEC1Q96DZ1 483 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 RRNAD1Q96FB5 475 aaKnown RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 PLEKHA8Q96JA3 519 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CEP170P1Q96L14 293 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CCDC17Q96LX7 622 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 OPALINQ96PE5 141 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 MXRA8Q9BRK3 442 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 PELOQ9BRX2 385 aaKnown RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 INPP5KQ9BT40 448 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 MYL10Q9BUA6 226 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 NLNQ9BYT8 704 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 SEMA4CQ9C0C4 833 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 LHX5Q9H2C1 402 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 EPC1Q9H2F5 836 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CDIP1Q9H305 208 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 UBQLN3Q9H347 655 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 RIMS4Q9H426 269 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 GOLPH3LQ9H4A5 285 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 METTL8Q9H825 291 aaKnown RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 MED20Q9H944 212 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 MRPS30Q9NP92 439 aaKnown RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.93□□□□□ -1.94
VIM-210ENST00000637053 RRP7BPQ9NSQ0 103 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 OLAHQ9NV23 265 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 THAP1Q9NVV9 213 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 RHBDL2Q9NX52 303 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CLEC5AQ9NY25 188 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 BTG4Q9NY30 223 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 HAO2Q9NYQ3 351 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms