RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 MAGOHBQ96A72 148 aaKnown RBP17.23■□□□□ 0.35
PNKP-225ENST00000636214 MIB2Q96AX9 1013 aa17.23■□□□□ 0.35
PNKP-225ENST00000636214 SPATA7Q9P0W8 599 aa17.23■□□□□ 0.35
PNKP-225ENST00000636214 TSR3Q9UJK0 312 aaKnown RBP17.23■□□□□ 0.35
PNKP-225ENST00000636214 VPS4AQ9UN37 437 aa17.23■□□□□ 0.35
PNKP-225ENST00000636214 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.22■□□□□ 0.35
PNKP-225ENST00000636214 A0A1B0GX78 115 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 GOLGA8KD6RF30 607 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 GOLGA8TH3BQL2 631 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 HCRTR1O43613 425 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 C1orf105O95561 183 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 OGNP20774 298 aaKnown RBP17.22■□□□□ 0.35
PNKP-225ENST00000636214 THOC5Q13769 683 aaKnown RBP17.22■□□□□ 0.35
PNKP-225ENST00000636214 GRM7Q14831 915 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 YOD1Q5VVQ6 348 aaPredicted RBP17.22■□□□□ 0.35
PNKP-225ENST00000636214 TTLL10Q6ZVT0 673 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 PRELID2Q8N945 189 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 FDCSPQ8NFU4 85 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 OR2Y1Q8NGV0 311 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 CPT1CQ8TCG5 803 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 LPGAT1Q92604 370 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 PTERQ96BW5 349 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 PBKQ96KB5 322 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 SELENOSQ9BQE4 189 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 CCDC68Q9H2F9 335 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 XAB2Q9HCS7 855 aaKnown RBP17.22■□□□□ 0.35
PNKP-225ENST00000636214 SLAMF7Q9NQ25 335 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 JRKLQ9Y4A0 524 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 NFS1Q9Y697 457 aa17.22■□□□□ 0.35
PNKP-225ENST00000636214 PRRC2CQ9Y520 2896 aaKnown RBP17.22■□□□□ 0.35
PNKP-225ENST00000636214 CTAGE9A4FU28 777 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 H3BMH7 237 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 CEACAM4O75871 244 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 ALPPP05187 535 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 ATP5DP30049 168 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 CCZ1BP86790 482 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 CCZ1P86791 482 aaPredicted RBP17.21■□□□□ 0.35
PNKP-225ENST00000636214 DHX34Q14147 1143 aaKnown RBP17.21■□□□□ 0.35
PNKP-225ENST00000636214 UBAP2LQ14157 1087 aaKnown RBP17.21■□□□□ 0.35
PNKP-225ENST00000636214 KCNJ11Q14654 390 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 TYSND1Q2T9J0 566 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 TTLL9Q3SXZ7 439 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 CTSL3PQ5NE16 218 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 VWA5B1Q5TIE3 1220 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 PAPD7Q5XG87 772 aaKnown RBP17.21■□□□□ 0.35
PNKP-225ENST00000636214 LMNTD1Q8N9Z9 388 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 ZUFSPQ96AP4 578 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 ZNF669Q96BR6 464 aaPredicted RBP17.21■□□□□ 0.35
PNKP-225ENST00000636214 FAM136AQ96C01 138 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 VPS50Q96JG6 964 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 MIPEPQ99797 713 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 MENTQ9BUN1 341 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 MLXIPLQ9NP71 852 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 FAM114A2Q9NRY5 505 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 CUTCQ9NTM9 273 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 MAP10Q9P2G4 905 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 CRYL1Q9Y2S2 319 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 COL12A1Q99715 3063 aa17.21■□□□□ 0.35
PNKP-225ENST00000636214 PCM1Q15154 2024 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 GOLGA6L10A0A0M3HER8 536 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 TCRBV7S3A2A0A539 114 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 MAGEB16A2A368 324 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 TARM1B6A8C7 271 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 NIPSNAP2O75323 286 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 KLF7O75840 302 aaPredicted RBP17.2■□□□□ 0.34
PNKP-225ENST00000636214 ERVK-10P10266 1014 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 ARNTP27540 789 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 GRIA3P42263 894 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 ADARP55265 1226 aaKnown RBP17.2■□□□□ 0.34
PNKP-225ENST00000636214 TSTA3Q13630 321 aaPredicted RBP17.2■□□□□ 0.34
PNKP-225ENST00000636214 RAPSNQ13702 412 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 GRB7Q14451 532 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 FAM214AQ32MH5 1076 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 NADK2Q4G0N4 442 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 ANKRD20A4Q4UJ75 823 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 NEPROQ6NW34 567 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 GRK7Q8WTQ7 553 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 FKBP10Q96AY3 582 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 BIRC8Q96P09 236 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 NUDT9Q9BW91 350 aa17.2■□□□□ 0.34
PNKP-225ENST00000636214 INTS10Q9NVR2 710 aaKnown RBP17.2■□□□□ 0.34
PNKP-225ENST00000636214 RUVBL2Q9Y230 463 aaKnown RBP17.2■□□□□ 0.34
PNKP-225ENST00000636214 SPTBN1Q01082 2364 aaKnown RBP17.2■□□□□ 0.34
PNKP-225ENST00000636214 NAV2Q8IVL1 2488 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 SDR42E2A6NKP2 422 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 ZNF839A8K0R7 811 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 PGRMC1O00264 195 aaKnown RBP17.19■□□□□ 0.34
PNKP-225ENST00000636214 DSCR3O14972 297 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 AVILO75366 819 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 CATP04040 527 aaKnown RBP17.19■□□□□ 0.34
PNKP-225ENST00000636214 CTSBP07858 339 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 MLNP12872 115 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 PKMP14618 531 aaKnown RBP17.19■□□□□ 0.34
PNKP-225ENST00000636214 VARSP26640 1264 aaKnown RBP17.19■□□□□ 0.34
PNKP-225ENST00000636214 CMPK1P30085 196 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 MAGEA6P43360 314 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 CD97P48960 835 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 VSX2P58304 361 aaPredicted RBP17.19■□□□□ 0.34
PNKP-225ENST00000636214 ESPL1Q14674 2120 aa17.19■□□□□ 0.34
PNKP-225ENST00000636214 DCAF10Q5QP82 559 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms