RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 GLYATQ6IB77 296 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 S100A7AQ86SG5 101 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 OR8H3Q8N146 312 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 SPATA6LQ8N4H0 392 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 JAGN1Q8N5M9 183 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 SIDT2Q8NBJ9 832 aaKnown RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 OR52E4Q8NGH9 312 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 TMEM234Q8WY98 164 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GFM1Q96RP9 751 aaKnown RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CCM2Q9BSQ5 444 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 Q9N2J8 555 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GRHPRQ9UBQ7 328 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 LAMP5Q9UJQ1 280 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 INSL6Q9Y581 213 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 A0A1W2PRQ8 180 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 WNT9AO14904 365 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GJB6O95452 261 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 SLC16A8O95907 504 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 FESP07332 822 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 BMP4P12644 408 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GNRHRP30968 328 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 RAB28P51157 221 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GNG2P59768 71 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 UBE2NP61088 152 aaKnown RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 NRG1Q02297 640 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF550Q7Z398 422 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CUZD1Q86UP6 607 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 PAQR7Q86WK9 346 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CCDC120Q96HB5 630 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CITED4Q96RK1 184 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GLOD4Q9HC38 313 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 PDE7BQ9NP56 450 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 FBXL12Q9NXK8 326 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ASB3Q9Y575 518 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 TECPR2O15040 1411 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 EDDM13A0A1B0GTR0 161 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 A0A1W2PPL8 197 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CDC7O00311 574 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 IRF6O14896 467 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ZBTB11O95625 1053 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 PRPS2P11908 318 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 COL6A2P12110 1019 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 NDST2P52849 883 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ECT2LQ008S8 904 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CHIT1Q13231 466 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 VMACQ2NL98 169 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GDF6Q6KF10 455 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 TMPRSS9Q7Z410 1059 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 SLC9A9Q8IVB4 645 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 SVOPLQ8N434 492 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ARL10Q8N8L6 244 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 EZH1Q92800 747 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 MIPEPQ99797 713 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 EBPLQ9BY08 206 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 DNTTIP1Q9H147 329 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 BCAS3Q9H6U6 928 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 DNAJC18Q9H819 358 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ICKQ9UPZ9 632 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 SALL1Q9NSC2 1324 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 A6NLC8 198 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 HMGN1P05114 100 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 PSPHP78330 225 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GNA12Q03113 381 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 UBAP2LQ14157 1087 aaKnown RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 LRRTM4Q86VH4 590 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 SERPINA9Q86WD7 417 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 FOXRED2Q8IWF2 684 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CELF5Q8N6W0 485 aaKnown RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 C12orf29Q8N999 325 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 NANOS1Q8WY41 292 aaKnown RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CAPNS2Q96L46 248 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 IPPKQ9H8X2 491 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ABCB8Q9NUT2 735 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF69Q9UC07 566 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CAPN6Q9Y6Q1 641 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 IQGAP3Q86VI3 1631 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ISPDA4D126 451 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 M0R2N6 131 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 LIASO43766 372 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ABCB7O75027 752 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ATP6AP2O75787 350 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CCNKO75909 580 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GLSO94925 669 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ADH1BP00325 375 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CYP3A4P08684 503 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GSTM2P28161 218 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 SLC15A1P46059 708 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 HSD17B7P56937 341 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 MZT1Q08AG7 82 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GNMTQ14749 295 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 PLEKHN1Q494U1 663 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CRTC2Q53ET0 693 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 IFI44LQ53G44 452 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF776Q68DI1 518 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 MSL3Q8N5Y2 521 aaKnown RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 MFSD2AQ8NA29 543 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 TWIST2Q8WVJ9 160 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 HPS1Q92902 700 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 PPM1MQ96MI6 270 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GORASP1Q9BQQ3 440 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms