RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 PIGQQ9BRB3 760 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 GPATCH1Q9BRR8 931 aaKnown RBP2.84□□□□□ -1.95
SRP54-214ENST00000630962 DCTN5Q9BTE1 182 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 OR2B2Q9GZK3 357 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 ATP13A3Q9H7F0 1226 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 MED20Q9H944 212 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 FAM207AQ9NSI2 230 aaPredicted RBP2.84□□□□□ -1.95
SRP54-214ENST00000630962 OSER1Q9NX31 292 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 GDE1Q9NZC3 331 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 CPSF2Q9P2I0 782 aaKnown RBP2.84□□□□□ -1.95
SRP54-214ENST00000630962 ASIC3Q9UHC3 531 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 TUBE1Q9UJT0 475 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 PTRH2Q9Y3E5 179 aaKnown RBP2.84□□□□□ -1.95
SRP54-214ENST00000630962 hCG_1807616A0A1W2PRN6 198 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 ADAMDEC1O15204 470 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 SH3BP5O60239 455 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 CRLF1O75462 422 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 WDHD1O75717 1129 aaPredicted RBP2.83□□□□□ -1.96
SRP54-214ENST00000630962 IGHV2-70P01814 119 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 SLC2A2P11168 524 aaPredicted RBP2.83□□□□□ -1.96
SRP54-214ENST00000630962 EEF1B2P24534 225 aaKnown RBP2.83□□□□□ -1.96
SRP54-214ENST00000630962 PIK3R1P27986 724 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 TLX1P31314 330 aaPredicted RBP2.83□□□□□ -1.96
SRP54-214ENST00000630962 PTGER4P35408 488 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 EIF2DP41214 584 aaKnown RBP2.83□□□□□ -1.96
SRP54-214ENST00000630962 LIG4P49917 911 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 MS4A2Q01362 244 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 GUCY2DQ02846 1103 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 SGCGQ13326 291 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 DRP2Q13474 957 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 MEA1Q16626 185 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 SYT14P1Q58G82 188 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 MFSD12Q6NUT3 480 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 RYBPQ8N488 228 aaPredicted RBP2.83□□□□□ -1.96
SRP54-214ENST00000630962 DCLK2Q8N568 766 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 NUP37Q8NFH4 326 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 OR5T2Q8NGG2 359 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 SLC22A18Q96BI1 424 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 C18orf12Q96KH6 178 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 EGFL8Q99944 293 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 POLR3GLQ9BT43 218 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 CHMP4AQ9BY43 222 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 TEX10Q9NXF1 929 aaPredicted RBP2.83□□□□□ -1.96
SRP54-214ENST00000630962 TAB2Q9NYJ8 693 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 MORF4L1Q9UBU8 362 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 ADD3Q9UEY8 706 aaKnown RBP2.83□□□□□ -1.96
SRP54-214ENST00000630962 DAPK2Q9UIK4 370 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 ABT1Q9ULW3 272 aaKnown RBP2.83□□□□□ -1.96
SRP54-214ENST00000630962 STUB1Q9UNE7 303 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 GPR34Q9UPC5 381 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 SNX8Q9Y5X2 465 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 PASKQ96RG2 1323 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 PCDH11YQ9BZA8 1340 aa2.83□□□□□ -1.96
SRP54-214ENST00000630962 TCRBV21S2A2A0A5A6 115 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 SYNDIG1LA6NDD5 238 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 NEMP2A6NFY4 417 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 TMEM221A6NGB7 291 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 ARPC2O15144 300 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 MOCS3O95396 460 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 SEC24AO95486 1093 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 GP1BBP13224 206 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 SHC1P29353 583 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 MMP12P39900 470 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 LEPRP48357 1165 aaKnown RBP2.82□□□□□ -1.96
SRP54-214ENST00000630962 ASCL1P50553 236 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 MAT1AQ00266 395 aaKnown RBP2.82□□□□□ -1.96
SRP54-214ENST00000630962 MYL7Q01449 175 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 LMOD3Q0VAK6 560 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 PRKG2Q13237 762 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 EFTUD2Q15029 972 aaKnown RBP eCLIP2.82□□□□□ -1.96
SRP54-214ENST00000630962 NECTIN1Q15223 517 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 GLIPR1L2Q4G1C9 344 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 TMEM211Q6ICI0 200 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 PRR27Q6MZM9 219 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 SLC25A47Q6Q0C1 308 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 RTN4RL2Q86UN3 420 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 AMER3Q8N944 861 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.82□□□□□ -1.96
SRP54-214ENST00000630962 KBTBD8Q8NFY9 601 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 VANGL1Q8TAA9 524 aaPredicted RBP2.82□□□□□ -1.96
SRP54-214ENST00000630962 ZNF519Q8TB69 540 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 GATAD1Q8WUU5 269 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 AZIN2Q96A70 460 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 TMCO6Q96DC7 493 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 SPDL1Q96EA4 605 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 C10orf90Q96M02 699 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 GAL3ST4Q96RP7 486 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 PSMB7Q99436 277 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 PKP2Q99959 881 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 LRRC61Q9BV99 259 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 SLC35C2Q9NQQ7 365 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 MAN2C1Q9NTJ4 1040 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 NDE1Q9NXR1 346 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 TBC1D29Q9UFV1 150 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 PA2G4Q9UQ80 394 aaKnown RBP2.82□□□□□ -1.96
SRP54-214ENST00000630962 TNNQ9UQP3 1299 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 PADI2Q9Y2J8 665 aa2.82□□□□□ -1.96
SRP54-214ENST00000630962 LOC105371242A0A075B767 164 aa2.81□□□□□ -1.96
SRP54-214ENST00000630962 MAGEC1O60732 1142 aa2.81□□□□□ -1.96
SRP54-214ENST00000630962 ENTPD3O75355 529 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms