RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CA9Q16790 459 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 C5orf22Q49AR2 442 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 HIST2H2BCQ6DN03 193 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 DARS2Q6PI48 645 aaKnown RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 ZNF534Q76KX8 674 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 CAND1Q86VP6 1230 aaKnown RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 PRR18Q8N4B5 295 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 TP53I13Q8NBR0 393 aaPredicted RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 OR56A4Q8NGH8 313 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 KLHL29Q96CT2 875 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 APOPT1Q96IL0 206 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 CTRCQ99895 268 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 TACO1Q9BSH4 297 aaKnown RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 OSBPL1AQ9BXW6 950 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 VPS11Q9H270 941 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 WDR26Q9H7D7 661 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 MKS1Q9NXB0 559 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 UBA2Q9UBT2 640 aaPredicted RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 C9orf172C9J069 976 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 TMX2-CTNND1H3BSU7 103 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 J3KR12 359 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 NTN3O00634 580 aaPredicted RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 TRAFD1O14545 582 aaPredicted RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 APOL1O14791 398 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 FGF10O15520 208 aaPredicted RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 DCTN3O75935 186 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 GSRP00390 522 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 GSNP06396 782 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 T-ENOLP0DO92 83 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 NAT1P18440 290 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 GNPDA1P46926 289 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 ILF3Q12906 894 aaKnown RBP eCLIP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 PARP6Q2NL67 630 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 KBTBD12Q3ZCT8 623 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 PPP6R3Q5H9R7 873 aaPredicted RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 HHATQ5VTY9 493 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 CRYBG3Q68DQ2 2970 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 SPRED1Q7Z699 444 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 ZC3H18Q86VM9 953 aaKnown RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 MAP7D3Q8IWC1 876 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 PALM2Q8IXS6 379 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 KIF2BQ8N4N8 673 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 TTC30BQ8N4P2 665 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 MCUQ8NE86 351 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 TCP10LQ8TDR4 215 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 NT5C3BQ969T7 300 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 ISG20Q96AZ6 181 aaKnown RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 ERP27Q96DN0 273 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 TMEM237Q96Q45 408 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 DHX35Q9H5Z1 703 aaKnown RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 PKDREJQ9NTG1 2253 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 TXLNGQ9NUQ3 528 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 SLC17A7Q9P2U7 560 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 ZNF212Q9UDV6 495 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 BSNQ9UPA5 3926 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 B3GALT1Q9Y5Z6 326 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 RPS6KL1Q9Y6S9 549 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 IQANK1A0A1B0GTG1 560 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 STMND1H3BQB6 276 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 NVLO15381 856 aaKnown RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 PIAS1O75925 651 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 ATP5HO75947 161 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 CPNE6O95741 557 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 CD3EP07766 207 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 GSTA2P09210 222 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 GLB1P16278 677 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 ITGB6P18564 788 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 RBL1P28749 1068 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 ACTR1BP42025 376 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 RGRP47804 291 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 MAPKAPK2P49137 400 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 TPI1P60174 286 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 ACTR1AP61163 376 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 KRT81Q14533 505 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 C14orf28Q4W4Y0 310 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 CERCAMQ5T4B2 595 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 ATP1A1-AS1Q5TC04 95 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 TLDC1Q6P9B6 456 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 C4orf22Q6V702 233 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 ZNF783Q6ZMS7 281 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 ZNF574Q6ZN55 896 aaPredicted RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 TRIM74Q86UV6 250 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 PELI3Q8N2H9 469 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 INPP5DQ92835 1189 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 FUBP1Q96AE4 644 aaKnown RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 SLC7A6OSQ96CW6 309 aaPredicted RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 LRRC39Q96DD0 335 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 PGAP3Q96FM1 320 aaPredicted RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 QKIQ96PU8 341 aaKnown RBP eCLIP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 PAIP2Q9BPZ3 127 aaKnown RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 YY1AP1Q9H869 796 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 SP110Q9HB58 689 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 SPATS2LQ9NUQ6 558 aaKnown RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 ETNK2Q9NVF9 386 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 TMEM248Q9NWD8 314 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 F8P00451 2351 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 TMEM82A0PJX8 343 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 A8MUI8 341 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 H7C0C1 242 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 KLF11O14901 512 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms