RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 CHSY3Q70JA7 882 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 PARS2Q7L3T8 475 aaKnown RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 KBTBD6Q86V97 674 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 ZDHHC13Q8IUH4 622 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 HMGCLL1Q8TB92 370 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 PROKR1Q8TCW9 393 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 MAGEC3Q8TD91 643 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 ASB9Q96DX5 294 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 RMND5BQ96G75 393 aaPredicted RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 PRAP1Q96NZ9 151 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 UHRF1Q96T88 793 aaPredicted RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 CGREF1Q99674 301 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 YIPF2Q9BWQ6 316 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 GPRC5BQ9NZH0 403 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 KLHL3Q9UH77 587 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 FAF1Q9UNN5 650 aaPredicted RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 CLCA2Q9UQC9 943 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 OAS3Q9Y6K5 1087 aaKnown RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 PRAMEF33A0A0G2JMD5 474 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 A0A1W2PP18 115 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 LINC01553A4QN01 128 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 MANBAO00462 879 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 MID1O15344 667 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 HSMCR30P0CW71 290 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 BCKDHAP12694 445 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 KIR3DL1P43629 444 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 MAPK8P45983 427 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 PRMT2P55345 433 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 SLBPQ14493 270 aaKnown RBP eCLIP7.31□□□□□ -1.24
PKP4-217ENST00000628904 FAM98BQ52LJ0 330 aaKnown RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 TANGO2Q6ICL3 276 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 PDE12Q6L8Q7 609 aaKnown RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 OLIG3Q7RTU3 272 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 PDSS2Q86YH6 399 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 FAM86B1Q8N7N1 296 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 VANGL1Q8TAA9 524 aaPredicted RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 TMIGD2Q96BF3 282 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 ASB2Q96Q27 587 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 PHOX2BQ99453 314 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 REXO4Q9GZR2 422 aaKnown RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 SYNDIG1Q9H7V2 258 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 RC3H2Q9HBD1 1191 aaKnown RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 C1orf109Q9NX04 203 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 TBC1D14Q9P2M4 693 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 DPP7Q9UHL4 492 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 RAB23Q9ULC3 237 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 LOC285556D6RIA3 1793 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 PNMA8CA0A1B0GUJ8 204 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 ISM1B1AKI9 464 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 OR7A17O14581 309 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 FPGTO14772 594 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 BCAS2O75934 225 aaPredicted RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 HOXB8P17481 243 aaPredicted RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 FSHRP23945 695 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 POLR2IP36954 125 aaKnown RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 PRKCQQ04759 706 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 C2orf80Q0P641 193 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 GANABQ14697 944 aaKnown RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 AASDHQ4L235 1098 aaPredicted RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 FAM78AQ5JUQ0 283 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 GPR107Q5VW38 600 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 SULT1C3Q6IMI6 304 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 TLDC1Q6P9B6 456 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 PRR23CQ6ZRP0 262 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 EFL1Q7Z2Z2 1120 aaKnown RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 VTCN1Q7Z7D3 282 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 THOC6Q86W42 341 aaKnown RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 HEATR4Q86WZ0 1026 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 CMTR2Q8IYT2 770 aaKnown RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 TAGAPQ8N103 731 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 DHRSXQ8N5I4 330 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 SNRNP27Q8WVK2 155 aaKnown RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 BIRC7Q96CA5 298 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 RHBDF1Q96CC6 855 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 CLIP3Q96DZ5 547 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 MYRFLQ96LU7 910 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 HTATIP2Q9BUP3 242 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 ASPSCR1Q9BZE9 553 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 TMEM245Q9H330 911 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 SLC32A1Q9H598 525 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 IL37Q9NZH6 218 aa7.31□□□□□ -1.24
PKP4-217ENST00000628904 TDRD15B5MCY1 1934 aaKnown RBP7.31□□□□□ -1.24
PKP4-217ENST00000628904 SCN5AQ14524 2016 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 WASHC1A8K0Z3 465 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 FADS2P1A8MWK0 482 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 H3BSA7 217 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 TAPBPO15533 448 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 GJA8P48165 433 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 ARHGDIAP52565 204 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 CLDN2P57739 230 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 LRP8Q14114 963 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 FRG2Q64ET8 278 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 NEK5Q6P3R8 708 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 AAGABQ6PD74 315 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 FBXO46Q6PJ61 603 aaPredicted RBP7.3□□□□□ -1.24
PKP4-217ENST00000628904 WASH2PQ6VEQ5 465 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 HTR3DQ70Z44 454 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 PHYKPLQ8IUZ5 450 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 KIAA2013Q8IYS2 634 aa7.3□□□□□ -1.24
PKP4-217ENST00000628904 KCT2Q8NC54 265 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms