RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 MID1IP1Q9NPA3 183 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 TCF7L2Q9NQB0 619 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 SAR1AQ9NR31 198 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 PHPT1Q9NRX4 125 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 KLC4Q9NSK0 619 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 ARL8BQ9NVJ2 186 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 ARL15Q9NXU5 204 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 TRIM33Q9UPN9 1127 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 RRP15Q9Y3B9 282 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 FIS1Q9Y3D6 152 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 TRAF6Q9Y4K3 522 aa9.25□□□□□ -0.93
PDLIM5-223ENST00000627587 ARHGEF33A8MVX0 844 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 GPR89AB7ZAQ6 455 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 H3BM21 787 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 SKAP2O75563 359 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 DKK1O94907 266 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 UNC5CO95185 931 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 GPR89BP0CG08 455 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 CDK4P11802 303 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 GGT5P36269 586 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 AFF3P51826 1226 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 AP1S2P56377 157 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 CORO7P57737 925 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 ERVPABLB-1P60509 514 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 CDKL1Q00532 357 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 TRAF3Q13114 568 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 NFE2L1Q14494 772 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 RBBP7Q16576 425 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 TMEM198Q66K66 360 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 LETMD1Q6P1Q0 360 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 METTL2BQ6P1Q9 378 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 CRTC3Q6UUV7 619 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 GOLGA7Q7Z5G4 137 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 PDZD3Q86UT5 571 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 CFAP206Q8IYR0 622 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 TCAIMQ8N3R3 496 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 DCBLD1Q8N8Z6 715 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 OR2L2Q8NH16 312 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 C1orf216Q8TAB5 229 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 BAHD1Q8TBE0 780 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 HM13Q8TCT9 377 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 MCOLN3Q8TDD5 553 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 ASB12Q8WXK4 309 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 SLC7A6OSQ96CW6 309 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 PTCD3Q96EY7 689 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 CD244Q9BZW8 370 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 EBF2Q9HAK2 575 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 PCM1Q15154 2024 aa9.24□□□□□ -0.93
PDLIM5-223ENST00000627587 POM121BA6NF01 834 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 MGAT4DA6NG13 374 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 LRRC72A6NJI9 287 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 E9PBE3 544 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 AZIN1O14977 448 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 CCNT2O60583 730 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 KLHL41O60662 606 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 CRCPO75575 148 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 POP7O75817 140 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 ATP5HO75947 161 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 ESRRBO95718 433 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 CATP04040 527 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 MYCLP1P12525 358 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 MAP4P27816 1152 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 ACADLP28330 430 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 SLC6A12P48065 614 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 HNMTP50135 292 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 ACTN3Q08043 901 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 GTF2H2Q13888 395 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 INAVAQ3KP66 663 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 PLA2G4EQ3MJ16 856 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 METTL21CQ5VZV1 264 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 GTF2H2CQ6P1K8 395 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 ASRGL1Q7L266 308 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 LRRTM4Q86VH4 590 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 OXR1Q8N573 874 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 OR2T34Q8NGX1 318 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 CFAP61Q8NHU2 1237 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 CDK15Q96Q40 435 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 ZNF382Q96SR6 550 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 OR52A5Q9H2C5 316 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 SGK2Q9HBY8 427 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 TXLNGQ9NUQ3 528 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 OPTCQ9UBM4 332 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 STK38LQ9Y2H1 464 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 ANGPTL3Q9Y5C1 460 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 ZZEF1O43149 2961 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 PRR19A6NJB7 356 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 H0Y8X5 98 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 K7EPI3 171 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 SLC31A1O15431 190 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 TNFSF14O43557 240 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 LATO43561 262 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 PRAMEF4O60810 478 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 STK16O75716 305 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 OR4F21O95013 312 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 CEACAM5P06731 702 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 NCF2P19878 526 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 ARL1P40616 181 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 GRK6P43250 576 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 PKNOX1P55347 436 aa9.23□□□□□ -0.93
PDLIM5-223ENST00000627587 ABRQ12979 859 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms