RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 AP2M1Q96CW1 435 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 GON7Q9BXV9 100 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 SPATC1LQ9H0A9 340 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 MFSD1Q9H3U5 465 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 OSGEPL1Q9H4B0 414 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 MRM3Q9HC36 420 aaKnown RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 AMBNQ9NP70 447 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 SPG21Q9NZD8 308 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 ERVK-18Q9QC07 812 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 HACL1Q9UJ83 578 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 RGPD8O14715 1765 aaPredicted RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 URADA6NGE7 173 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 CLIC1O00299 241 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 UBA1P22314 1058 aaKnown RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 NUMBP49757 651 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 SCARB2Q14108 478 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 ANKRD46Q86W74 232 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 IQCF2Q8IXL9 164 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 CRYBG2Q8N1P7 616 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 NATD1Q8N6N6 113 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 BARD1Q99728 777 aaKnown RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 MRPL9Q9BYD2 267 aaKnown RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 UCK2Q9BZX2 261 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 BHLHE41Q9C0J9 482 aaPredicted RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 MEAF6Q9HAF1 191 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 SLC39A1Q9NY26 324 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 TAS2R3Q9NYW6 316 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 PPIEQ9UNP9 301 aaKnown RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 BCL9LQ86UU0 1499 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 CNTN5O94779 1100 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 ZNF286BP0CG31 522 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 DNASE1P24855 282 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 HTR2AP28223 471 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 SLC51AQ86UW1 340 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 COQ8AQ8NI60 647 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 DUSP26Q9BV47 211 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 LGR4Q9BXB1 951 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 LHPPQ9H008 270 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 TMEM27Q9HBJ8 222 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 PCDH10Q9P2E7 1040 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 PRORSD1PA6NEY8 169 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 GNRH1P01148 92 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 CSF2P04141 144 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 C8GP07360 202 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 CLK3P49761 638 aaKnown RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 BMXP51813 675 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 FCGRTP55899 365 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 C9orf57Q5W0N0 161 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 FAM171BQ6P995 826 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 FRRS1Q6ZNA5 592 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 RTL4Q6ZR62 310 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 IFNLR1Q8IU57 520 aaPredicted RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 VWA5B2Q8N398 1253 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 WDR48Q8TAF3 677 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 UTP4Q969X6 686 aaKnown RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 NTPCRQ9BSD7 190 aaKnown RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 SAV1Q9H4B6 383 aaPredicted RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 NPAP1Q9NZP6 1156 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 ENPP5Q9UJA9 477 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 CPQQ9Y646 472 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 ANXA2P2A6NMY6 339 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 PRH1P02810 166 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 ANXA2P07355 339 aaKnown RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 EIF2S3P41091 472 aaKnown RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 MAGEA12P43365 314 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 EMX2Q04743 252 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 HNRNPA0Q13151 305 aaKnown RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 DUOXA1Q1HG43 343 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 FKBP1CQ5VVH2 108 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 MEDAGQ5VYS4 303 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 KANK2Q63ZY3 851 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 MED27Q6P2C8 311 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 ULK3Q6PHR2 472 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 JAZF1Q86VZ6 243 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 TRAPPC5Q8IUR0 188 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 GDPD1Q8N9F7 314 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 NETO2Q8NC67 525 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 ART5Q96L15 291 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 SIGLEC10Q96LC7 697 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 ZNF597Q96LX8 424 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 C1QTNF7Q9BXJ2 289 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 TP63Q9H3D4 680 aaPredicted RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 TRPV4Q9HBA0 871 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 HCN3Q9P1Z3 774 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 SRRDQ9UH36 339 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 TMEM233B4DJY2 109 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 SLC1A7O00341 560 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 ARL6IP5O75915 188 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 IL1R2P27930 398 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 RPIAP49247 311 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 NKX2-5P52952 324 aaPredicted RBP8.72□□□□□ -1.01
VCL-206ENST00000623461 RBBP4Q09028 425 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 GRIK2Q13002 908 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 ALG11Q2TAA5 492 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 GLIS1Q8NBF1 620 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 PIGKQ92643 395 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 FLRT1Q9NZU1 646 aa8.72□□□□□ -1.01
VCL-206ENST00000623461 IQCMA0A1B0GVH7 501 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 ALDH2P05091 517 aa8.71□□□□□ -1.01
VCL-206ENST00000623461 HSD17B1P14061 328 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms