RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 MAGP20916 626 aa17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 UGT8Q16880 541 aa17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 RNASEH2BQ5TBB1 312 aaKnown RBP17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 FAM69BQ5VUD6 431 aa17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 ZNF385CQ66K41 422 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 ZNF470Q6ECI4 717 aa17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 CNSTQ6PJW8 725 aa17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 SPNS2Q8IVW8 549 aa17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 DENND6AQ8IWF6 608 aa17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 GPR135Q8IZ08 494 aa17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 C9orf43Q8TAL5 461 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 N4BP2L2Q92802 583 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 RAD51AP1Q96B01 352 aa17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 NLNQ9BYT8 704 aa17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 SLC7A5P2Q9GIP4 190 aa17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 DPH5Q9H2P9 285 aa17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 TSR3Q9UJK0 312 aaKnown RBP17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 SNX24Q9Y343 169 aa17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 TENM4Q6N022 2769 aa17.29■□□□□ 0.36
SCAMP4-213ENST00000621748 PRICKLE3O43900 615 aaPredicted RBP17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 RAB40ALP0C0E4 278 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 PKMP14618 531 aaKnown RBP17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 MRPS25P82663 173 aaKnown RBP17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 GUCY2DQ02846 1103 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 CTBP1Q13363 440 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 THOC5Q13769 683 aaKnown RBP17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 MORF4L2Q15014 288 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 ACSBG2Q5FVE4 666 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 TEX35Q5T0J7 233 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 TTC23LQ6PF05 361 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 FAM198BQ6UWH4 519 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 IFT20Q8IY31 132 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 ENDOVQ8N8Q3 282 aaKnown RBP17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 DENND1AQ8TEH3 1009 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 SLC22A18Q96BI1 424 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 FBXO6Q9NRD1 293 aaPredicted RBP17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 FAM114A2Q9NRY5 505 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 INTS10Q9NVR2 710 aaKnown RBP17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 MAN2B2Q9Y2E5 1009 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 MAD1L1Q9Y6D9 718 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 ANKRD12Q6UB98 2062 aa17.28■□□□□ 0.36
SCAMP4-213ENST00000621748 USP1O94782 785 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 ZIC2O95409 532 aaPredicted RBP17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 MATN4O95460 622 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 HBQ1P09105 142 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 CBSLP0DN79 551 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 CBSP35520 551 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 PMS2P54278 862 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 SLC7A5Q01650 507 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 SF1Q15637 639 aaKnown RBP17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 FCRL6Q6DN72 434 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 ZNF549Q6P9A3 640 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 CEP128Q6ZU80 1094 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 ZBTB2Q8N680 514 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 ZNF655Q8N720 491 aaPredicted RBP17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 THAP4Q8WY91 577 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 SEC14L1Q92503 715 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 FOPNLQ96NB1 174 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 SLC30A3Q99726 388 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 C20orf96Q9NUD7 363 aaPredicted RBP17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 EURLQ9NYK6 297 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 WHRNQ9P202 907 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 TCFL5Q9UL49 500 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 SNX7Q9UNH6 387 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 PLCL2Q9UPR0 1127 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 VPS9D1Q9Y2B5 631 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 MED16Q9Y2X0 877 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 AP1M2Q9Y6Q5 423 aa17.27■□□□□ 0.36
SCAMP4-213ENST00000621748 K7EM74 188 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 ZSCAN9O15535 394 aaPredicted RBP17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 DNAJB5O75953 348 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 ATP5DP30049 168 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 CCNFP41002 786 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 GRIA3P42263 894 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 SLC1A2P43004 574 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 CLCN7P51798 805 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 LONRF1Q17RB8 773 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 KLHL38Q2WGJ6 581 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 C1orf189Q5VU69 101 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 RHBDD2Q6NTF9 364 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 FIGLAQ6QHK4 219 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 ATG14Q6ZNE5 492 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 MCATQ8IVS2 390 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 APLFQ8IW19 511 aaPredicted RBP17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 PDIK1LQ8N165 341 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 NOA1Q8NC60 698 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 HMGCLL1Q8TB92 370 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 ADAMTS17Q8TE56 1095 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 IFT81Q8WYA0 676 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 DPH2Q9BQC3 489 aaPredicted RBP17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 RAB11FIP5Q9BXF6 653 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 TRIM55Q9BYV6 548 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 TRIM4Q9C037 500 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 DHCR7Q9UBM7 475 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 MTRF1LQ9UGC7 380 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 TLK1Q9UKI8 766 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 TP53TG5Q9Y2B4 290 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 FAM169AQ9Y6X4 670 aa17.26■□□□□ 0.35
SCAMP4-213ENST00000621748 A0A1W2PPV9 198 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms