RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 AREL1O15033 823 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 ETHE1O95571 254 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 CDH1P12830 882 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 PVRP15151 417 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 IL12AP29459 219 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 RPS14P62263 151 aaKnown RBP10.23□□□□□ -0.77
VPS11-208ENST00000621676 DOC2AQ14183 400 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 LAPTM4AQ15012 233 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 UGT3A2Q3SY77 523 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 C6orf163Q5TEZ5 329 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 PNCKQ6P2M8 343 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 GCNT7Q6ZNI0 430 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 OLIG3Q7RTU3 272 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 TOE1Q96GM8 510 aaKnown RBP10.23□□□□□ -0.77
VPS11-208ENST00000621676 SLC2A11Q9BYW1 496 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 ANKRA2Q9H9E1 313 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 DZANK1Q9NVP4 752 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 IRAK4Q9NWZ3 460 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 BOD1L1Q8NFC6 3051 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 OR2W5A6NFC9 320 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 ZNF860A6NHJ4 632 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 H7C0S8 307 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 CATP04040 527 aaKnown RBP10.23□□□□□ -0.77
VPS11-208ENST00000621676 ASLP04424 464 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 THRAP10827 490 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 PTNP21246 168 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 NFKBIAP25963 317 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 TPMTP51580 245 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 RAB8AP61006 207 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 TBPL1P62380 186 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 ELP6Q0PNE2 266 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 HTR4Q13639 388 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 NAA25Q14CX7 972 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 FAM46CQ5VWP2 391 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 DPPA4Q7L190 304 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 OR7A2PQ8NGA2 310 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 RDH11Q8TC12 318 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 ASB11Q8WXH4 323 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 OR4K3Q96R72 315 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 EFCAB1Q9HAE3 211 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 DNAJC28Q9NX36 388 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 SDK2Q58EX2 2172 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 GSAPA4D1B5 854 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 CARNS1A5YM72 827 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 NPHS1O60500 1241 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 MAGEC1O60732 1142 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 FTH1P02794 183 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 SRPRAP08240 638 aaKnown RBP10.23□□□□□ -0.77
VPS11-208ENST00000621676 SNRPB2P08579 225 aaKnown RBP10.23□□□□□ -0.77
VPS11-208ENST00000621676 HOXB8P17481 243 aaPredicted RBP10.23□□□□□ -0.77
VPS11-208ENST00000621676 CD22P20273 847 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 KCNK10P57789 538 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 PSME3P61289 254 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 DMC1Q14565 340 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 TRIP10Q15642 601 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 MUM1Q2TAK8 710 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 ZNF776Q68DI1 518 aaPredicted RBP10.23□□□□□ -0.77
VPS11-208ENST00000621676 REP15Q6BDI9 236 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 TTC23LQ6PF05 361 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 LMNTD2Q8IXW0 634 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 AMER2Q8N7J2 671 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 WFIKKN2Q8TEU8 576 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 UCN3Q969E3 161 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 FATE1Q969F0 183 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 NCLNQ969V3 563 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 MARK1Q9P0L2 795 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 MAFFQ9ULX9 164 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 POMPQ9Y244 141 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 SLC27A6Q9Y2P4 619 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 NDUFAF1Q9Y375 327 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 SNX8Q9Y5X2 465 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 U3KQV3 271 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 SCN8AQ9UQD0 1980 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 DCHS1Q96JQ0 3298 aa10.23□□□□□ -0.77
VPS11-208ENST00000621676 CCDC154A6NI56 674 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 ZNF189O75820 626 aaPredicted RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 SLC35G4P0C7Q5 338 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 C8orf89P0DMQ9 161 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 MYCLP1P12525 358 aaPredicted RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 RFX3P48380 749 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 ADPRHP54922 357 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 RPS13P62277 151 aaKnown RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 TRAF3Q13114 568 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 DEFB110Q30KQ9 67 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 PRRT3Q5FWE3 981 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 MACC1Q6ZN28 852 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 ZNF621Q6ZSS3 439 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 ZNF438Q7Z4V0 828 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 TRAM1L1Q8N609 369 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 OR6Y1Q8NGX8 325 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 SPDL1Q96EA4 605 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 RDH14Q9HBH5 336 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 SCHIP1Q9P0W5 487 aaPredicted RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 CFAP47Q6ZTR5 3102 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 PRORSD1PA6NEY8 169 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 SRRM3A6NNA2 597 aaPredicted RBP10.22□□□□□ -0.77
VPS11-208ENST00000621676 CLDN9O95484 217 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 OTCP00480 354 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 ZNF30P17039 623 aa10.22□□□□□ -0.77
VPS11-208ENST00000621676 ADARP55265 1226 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms