RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 H3BNC9 293 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 SLC14A1Q13336 389 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 PLEKHG6Q3KR16 790 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 ANKRD46Q86W74 232 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 LKAAEAR1Q8TD35 194 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 USP7Q93009 1102 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 TXNDC15Q96J42 360 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 DCSTAMPQ9H295 470 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 TRPS1Q9UHF7 1281 aa19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 SAMD4AQ9UPU9 718 aaKnown RBP19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 ZFP37Q9Y6Q3 630 aaPredicted RBP19.1■□□□□ 0.65
PDLIM3-212ENST00000620787 WBP4O75554 376 aaKnown RBP19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 PARNO95453 639 aaKnown RBP19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 ZNF24P17028 368 aa19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 ITGB6P18564 788 aa19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 EFNA1P20827 205 aaPredicted RBP19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 MAGEA11P43364 429 aa19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 CACNG1Q06432 222 aa19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 ATAD3BQ5T9A4 648 aa19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 UBE2UQ5VVX9 321 aa19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 TSPYL5Q86VY4 417 aaPredicted RBP19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 HTRA1Q92743 480 aa19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 UBE2FQ969M7 185 aa19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 EGFL8Q99944 293 aa19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 CIPCQ9C0C6 399 aa19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 WWOXQ9NZC7 414 aa19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 ATP11BQ9Y2G3 1177 aa19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 DLGAP4Q9Y2H0 992 aa19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 PCDHB1Q9Y5F3 818 aa19.09■□□□□ 0.65
PDLIM3-212ENST00000620787 A8MU76 341 aa19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 DIRAS1O95057 198 aa19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 CCNDBP1O95273 360 aa19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 EIF2S1P05198 315 aaKnown RBP19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 FPR1P21462 350 aa19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 DNAJA1P31689 397 aaKnown RBP19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 S100A3P33764 101 aa19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 RPS14P62263 151 aaKnown RBP19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 ZNF280BQ86YH2 543 aa19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 NTMT1Q9BV86 223 aa19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 APOL5Q9BWW9 433 aa19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 ADGRE3Q9BY15 652 aa19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 FAM126AQ9BYI3 521 aaPredicted RBP19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 SIAEQ9HAT2 523 aa19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 ZBTB20Q9HC78 741 aaPredicted RBP19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 PDP1Q9P0J1 537 aaPredicted RBP19.08■□□□□ 0.65
PDLIM3-212ENST00000620787 PABPN1LA6NDY0 278 aaKnown RBP19.08■□□□□ 0.64
PDLIM3-212ENST00000620787 LOC730098B7Z3J9 87 aa19.08■□□□□ 0.64
PDLIM3-212ENST00000620787 SEMG1P04279 462 aa19.08■□□□□ 0.64
PDLIM3-212ENST00000620787 RCVRNP35243 200 aa19.08■□□□□ 0.64
PDLIM3-212ENST00000620787 ARHGDIAP52565 204 aa19.08■□□□□ 0.64
PDLIM3-212ENST00000620787 USP50Q70EL3 339 aaPredicted RBP19.08■□□□□ 0.64
PDLIM3-212ENST00000620787 AHSA2Q719I0 299 aa19.08■□□□□ 0.64
PDLIM3-212ENST00000620787 IPCEF1Q8WWN9 437 aaPredicted RBP19.08■□□□□ 0.64
PDLIM3-212ENST00000620787 SLC38A4Q969I6 547 aa19.08■□□□□ 0.64
PDLIM3-212ENST00000620787 PTPN18Q99952 460 aa19.08■□□□□ 0.64
PDLIM3-212ENST00000620787 EPS8L2Q9H6S3 715 aa19.08■□□□□ 0.64
PDLIM3-212ENST00000620787 RASSF1Q9NS23 344 aa19.08■□□□□ 0.64
PDLIM3-212ENST00000620787 METTL15A6NJ78 407 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 H0Y626 953 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 hCG_2039718K7EN88 272 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 KCNK2O95069 426 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 TRIM16O95361 564 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 EBLN1P0CF75 366 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 LIPAP38571 399 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 PCYT1AP49585 367 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 CLDN8P56748 225 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 RPS24P62847 133 aaKnown RBP19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 ZNF181Q2M3W8 571 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 ZNF404Q494X3 552 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 COLEC12Q5KU26 742 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 KIAA1614Q5VZ46 1190 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 STEAP3Q658P3 488 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 PTRHD1Q6GMV3 140 aaKnown RBP19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 UBTD2Q8WUN7 234 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 APH1BQ8WW43 257 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 EID2BQ96D98 161 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 PITX2Q99697 317 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 ACPTQ9BZG2 426 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 MMP27Q9H306 513 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 IL17CQ9P0M4 197 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 RNF181Q9P0P0 153 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 TLR5O60602 858 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 C1QCP02747 245 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 CA5AP35218 305 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 UGT2B10P36537 528 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 PPP3CCP48454 512 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 VLDLRP98155 873 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 PROX2Q3B8N5 592 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 FAM171A1Q5VUB5 890 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 DOK6Q6PKX4 331 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 CXCL17Q6UXB2 119 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 AKAP14Q86UN6 197 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 MTFMTQ96DP5 389 aaKnown RBP19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 ITPAQ9BY32 194 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 KRT84Q9NSB2 600 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 GPRC5BQ9NZH0 403 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 KLHL3Q9UH77 587 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 PPT2Q9UMR5 302 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 PIKFYVEQ9Y2I7 2098 aa19.07■□□□□ 0.64
PDLIM3-212ENST00000620787 AGAP5A6NIR3 686 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms