RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 C19orf43Q9BQ61 176 aa15.65■□□□□ 0.1
CD40-207ENST00000620709 ZNF71Q9NQZ8 489 aaPredicted RBP15.65■□□□□ 0.1
CD40-207ENST00000620709 ASH1LQ9NR48 2969 aaKnown RBP15.65■□□□□ 0.1
CD40-207ENST00000620709 INTS9Q9NV88 658 aaKnown RBP15.65■□□□□ 0.1
CD40-207ENST00000620709 SMOXQ9NWM0 555 aa15.65■□□□□ 0.1
CD40-207ENST00000620709 MKS1Q9NXB0 559 aa15.65■□□□□ 0.1
CD40-207ENST00000620709 PSD3Q9NYI0 1048 aa15.65■□□□□ 0.1
CD40-207ENST00000620709 IGHV5-51A0A0C4DH38 117 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 CCDC162PA2VCL2 907 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 MGAT4DA6NG13 374 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 GOLGA8RI6L899 631 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 TYROBPO43914 113 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 SHOX2O60902 331 aaPredicted RBP15.64■□□□□ 0.09
CD40-207ENST00000620709 ZWINTO95229 277 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 CCNYL3P0C7X3 344 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 RALBP11234 206 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 OGNP20774 298 aaKnown RBP15.64■□□□□ 0.09
CD40-207ENST00000620709 F8A1P23610 371 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 SERPINB8P50452 374 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 GNGT1P63211 74 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 MPP1Q00013 466 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 CTBP1Q13363 440 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 TUBB3Q13509 450 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 MAP7Q14244 749 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 ARMC6Q6NXE6 501 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 SH2D5Q6ZV89 423 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 CILP2Q8IUL8 1156 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 SPDYE1Q8NFV5 336 aaPredicted RBP15.64■□□□□ 0.09
CD40-207ENST00000620709 OR4L1Q8NH43 312 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 ISL2Q96A47 359 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 SGSM3Q96HU1 749 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 GPR22Q99680 433 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 MAP3K3Q99759 626 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 PDE7BQ9NP56 450 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 CATSPERZQ9NTU4 200 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 HRASLS2Q9NWW9 162 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 EPHA6Q9UF33 1036 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 PCDHB3Q9Y5E6 796 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 MYO18BQ8IUG5 2567 aa15.64■□□□□ 0.09
CD40-207ENST00000620709 OR6C74A6NCV1 312 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 OR51F1A6NGY5 319 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 H7C0S8 307 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 COPEO14579 308 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 CD3EAPO15446 510 aaKnown RBP15.63■□□□□ 0.09
CD40-207ENST00000620709 SUV39H1O43463 412 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 AHSGP02765 367 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 ALDOAP04075 364 aaKnown RBP15.63■□□□□ 0.09
CD40-207ENST00000620709 EBLN1P0CF75 366 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 NELFEP18615 380 aaKnown RBP15.63■□□□□ 0.09
CD40-207ENST00000620709 ITGALP20701 1170 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 ERV3-1Q14264 604 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 CERS6Q6ZMG9 384 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 OOSP2Q86WS3 158 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 OR2L2Q8NH16 312 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 PCMTD2Q9NV79 361 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 RARRES3Q9UL19 164 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 ACSL5Q9ULC5 683 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 TM9SF1O15321 606 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 F7P08709 466 aaPredicted RBP15.63■□□□□ 0.09
CD40-207ENST00000620709 FGF5P12034 268 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 FOLR1P15328 257 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 GABRB3P28472 473 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 TYK2P29597 1187 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 MAGEA12P43365 314 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 XIAPP98170 497 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 MPP2Q14168 576 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 FASTKD1Q53R41 847 aaKnown RBP15.63■□□□□ 0.09
CD40-207ENST00000620709 ZRANB3Q5FWF4 1079 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 CYB5D1Q6P9G0 228 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 MICALCLQ6ZW33 695 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 TAS2R42Q7RTR8 314 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 SDCCAG8Q86SQ7 713 aaPredicted RBP15.63■□□□□ 0.09
CD40-207ENST00000620709 LILRA3Q8N6C8 439 aaPredicted RBP15.63■□□□□ 0.09
CD40-207ENST00000620709 C9orf43Q8TAL5 461 aaPredicted RBP15.63■□□□□ 0.09
CD40-207ENST00000620709 MGARPQ8TDB4 240 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 APOBEC4Q8WW27 367 aaKnown RBP15.63■□□□□ 0.09
CD40-207ENST00000620709 ULK4Q96C45 1275 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 CABS1Q96KC9 395 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 COPS8Q99627 209 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 RAB33BQ9H082 229 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 IQCGQ9H095 443 aaKnown RBP15.63■□□□□ 0.09
CD40-207ENST00000620709 FBXO6Q9NRD1 293 aaPredicted RBP15.63■□□□□ 0.09
CD40-207ENST00000620709 SNX15Q9NRS6 342 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 SOHLH2Q9NX45 425 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 PADI1Q9ULC6 663 aa15.63■□□□□ 0.09
CD40-207ENST00000620709 MTO1Q9Y2Z2 717 aaKnown RBP15.63■□□□□ 0.09
CD40-207ENST00000620709 CDC14CA4D256 554 aa15.62■□□□□ 0.09
CD40-207ENST00000620709 OR5K3A6NET4 321 aa15.62■□□□□ 0.09
CD40-207ENST00000620709 CFAP99D6REC4 459 aa15.62■□□□□ 0.09
CD40-207ENST00000620709 TIAF1O95411 115 aa15.62■□□□□ 0.09
CD40-207ENST00000620709 NTRK1P04629 796 aa15.62■□□□□ 0.09
CD40-207ENST00000620709 MC4RP32245 332 aa15.62■□□□□ 0.09
CD40-207ENST00000620709 RPA3P35244 121 aaPredicted RBP15.62■□□□□ 0.09
CD40-207ENST00000620709 TYSND1Q2T9J0 566 aa15.62■□□□□ 0.09
CD40-207ENST00000620709 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.62■□□□□ 0.09
CD40-207ENST00000620709 BCL7AQ4VC05 210 aa15.62■□□□□ 0.09
CD40-207ENST00000620709 TTC19Q6DKK2 380 aaPredicted RBP15.62■□□□□ 0.09
CD40-207ENST00000620709 PWWP2BQ6NUJ5 590 aa15.62■□□□□ 0.09
CD40-207ENST00000620709 SNX20Q7Z614 316 aa15.62■□□□□ 0.09
CD40-207ENST00000620709 TCP10LQ8TDR4 215 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms