RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 RECQL5O94762 991 aaPredicted RBP12.06□□□□□ -0.48
CIITA-212ENST00000618207 ADH1CP00326 375 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 FTH1P02794 183 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 HNRNPA1P09651 372 aaKnown RBP eCLIP12.06□□□□□ -0.48
CIITA-212ENST00000618207 ZNF23P17027 643 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 CD22P20273 847 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 JAK1P23458 1154 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 FOXM1Q08050 763 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 PWP1Q13610 501 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 GRM2Q14416 872 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 PLEKHS1Q5SXH7 462 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 ZDHHC20Q5W0Z9 365 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 TMEM214Q6NUQ4 689 aaKnown RBP12.06□□□□□ -0.48
CIITA-212ENST00000618207 TRIM46Q7Z4K8 759 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 C10orf111Q8N326 155 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 TRAM1L1Q8N609 369 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 MAGEE2Q8TD90 523 aaPredicted RBP12.06□□□□□ -0.48
CIITA-212ENST00000618207 BPIFB1Q8TDL5 484 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 UBTD2Q8WUN7 234 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 NCLNQ969V3 563 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 ARRDC3Q96B67 414 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 TSC22D3Q99576 134 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 NRTNQ99748 197 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 SLC25A37Q9NYZ2 338 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 UTS2RQ9UKP6 389 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 SNX6Q9UNH7 406 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 BRWD1Q9NSI6 2320 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 PRR23AA6NEV1 266 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 HEPACAM2A8MVW5 462 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 GFYI3L273 518 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 AXIN1O15169 862 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 ATG13O75143 517 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 FAM58BPP0C7Q3 252 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 PBX2P40425 430 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 USP39Q53GS9 565 aaKnown RBP12.06□□□□□ -0.48
CIITA-212ENST00000618207 AGTRAPQ6RW13 159 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 TRMT11Q7Z4G4 463 aaKnown RBP12.06□□□□□ -0.48
CIITA-212ENST00000618207 TECPR1Q7Z6L1 1165 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 THOC6Q86W42 341 aaKnown RBP12.06□□□□□ -0.48
CIITA-212ENST00000618207 NPAS3Q8IXF0 933 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 GPR156Q8NFN8 814 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 CYGBQ8WWM9 190 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 CHID1Q9BWS9 393 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 ARMC1Q9NVT9 282 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 EI24O14681 340 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 HNRNPRO43390 633 aaKnown RBP12.06□□□□□ -0.48
CIITA-212ENST00000618207 GBAP04062 536 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 MYCLP1P12525 358 aaPredicted RBP12.06□□□□□ -0.48
CIITA-212ENST00000618207 CDKN2CP42773 168 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 GPR1P46091 355 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 IST1P53990 364 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 EEFSECP57772 596 aaKnown RBP12.06□□□□□ -0.48
CIITA-212ENST00000618207 KIAA0040Q15053 153 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 LIN52Q52LA3 116 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 FRG2Q64ET8 278 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 CWF19L1Q69YN2 538 aaKnown RBP12.06□□□□□ -0.48
CIITA-212ENST00000618207 OR4F3Q6IEY1 312 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 SLC30A9Q6PML9 568 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 ARHGAP22Q7Z5H3 698 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 TMEM126BQ8IUX1 230 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 SYTL1Q8IYJ3 562 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 FAM47BQ8NA70 645 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 DDHD1Q8NEL9 900 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 TRPV3Q8NET8 790 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 OR2T12Q8NG77 320 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 PNPT1Q8TCS8 783 aaKnown RBP12.06□□□□□ -0.48
CIITA-212ENST00000618207 HERVK_113Q902F9 699 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 OTUB2Q96DC9 234 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 FRG2BQ96QU4 278 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 GPRC5BQ9NZH0 403 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 LIMD1Q9UGP4 676 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 INVSQ9Y283 1065 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 TMEM98Q9Y2Y6 226 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 PCDHB14Q9Y5E9 798 aa12.06□□□□□ -0.48
CIITA-212ENST00000618207 RFXAPO00287 272 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 CLPTM1O96005 669 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 SDC1P18827 310 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 S100A3P33764 101 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 MAGEA10P43363 369 aaPredicted RBP12.05□□□□□ -0.48
CIITA-212ENST00000618207 SLC6A12P48065 614 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 MEF2AQ02078 507 aaPredicted RBP12.05□□□□□ -0.48
CIITA-212ENST00000618207 MAD2L1Q13257 205 aaPredicted RBP12.05□□□□□ -0.48
CIITA-212ENST00000618207 LAPTM5Q13571 262 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 ZNF234Q14588 700 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 ZIK1Q3SY52 487 aaPredicted RBP12.05□□□□□ -0.48
CIITA-212ENST00000618207 DPPA4Q7L190 304 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 LRRC70Q7Z2Q7 622 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 KIAA0907Q7Z7F0 614 aaPredicted RBP12.05□□□□□ -0.48
CIITA-212ENST00000618207 OFCC1Q8IZS5 231 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 ZNF557Q8N988 423 aaPredicted RBP12.05□□□□□ -0.48
CIITA-212ENST00000618207 ZNF583Q96ND8 569 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 SLC2A11Q9BYW1 496 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 AGPAT4Q9NRZ5 378 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 MARK1Q9P0L2 795 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 NEUROG3Q9Y4Z2 214 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 CFAP20Q9Y6A4 193 aaKnown RBP12.05□□□□□ -0.48
CIITA-212ENST00000618207 C2orf16Q68DN1 1984 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 TCRBV5S2A0A599 114 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 H3BM21 787 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 GMNNO75496 209 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms