RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 TRIM55Q9BYV6 548 aa24.24■■□□□ 1.47
VEGFA-228ENST00000617771 ING2Q9H160 280 aa24.24■■□□□ 1.47
VEGFA-228ENST00000617771 CCDC68Q9H2F9 335 aa24.24■■□□□ 1.47
VEGFA-228ENST00000617771 ZCWPW2A0A1B0GU75 182 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 ZNF185O15231 689 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 PRICKLE3O43900 615 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-228ENST00000617771 DNAJB5O75953 348 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 MATN4O95460 622 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 CTSBP07858 339 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 TCP1P17987 556 aaKnown RBP24.23■■□□□ 1.47
VEGFA-228ENST00000617771 PTGIRP43119 386 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 LONRF1Q17RB8 773 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 TTLL9Q3SXZ7 439 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 CCSMST1Q4G0I0 132 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 MLIPQ5VWP3 458 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 CPZQ66K79 652 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 ASB18Q6ZVZ8 466 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 RAB43Q86YS6 212 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 CALML6Q8TD86 181 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 DENND1AQ8TEH3 1009 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 ZUFSPQ96AP4 578 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 GBP5Q96PP8 586 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 EPN3Q9H201 632 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 C20orf96Q9NUD7 363 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-228ENST00000617771 IFT80Q9P2H3 777 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-228ENST00000617771 DHCR7Q9UBM7 475 aaKnown RBP24.23■■□□□ 1.47
VEGFA-228ENST00000617771 NDOR1Q9UHB4 597 aa24.23■■□□□ 1.47
VEGFA-228ENST00000617771 NR1D1P20393 614 aa24.22■■□□□ 1.47
VEGFA-228ENST00000617771 ARSFP54793 590 aa24.22■■□□□ 1.47
VEGFA-228ENST00000617771 ACSBG2Q5FVE4 666 aa24.22■■□□□ 1.47
VEGFA-228ENST00000617771 FAM69BQ5VUD6 431 aa24.22■■□□□ 1.47
VEGFA-228ENST00000617771 FCRL6Q6DN72 434 aa24.22■■□□□ 1.47
VEGFA-228ENST00000617771 DENND6AQ8IWF6 608 aa24.22■■□□□ 1.47
VEGFA-228ENST00000617771 TEX19Q8NA77 164 aa24.22■■□□□ 1.47
VEGFA-228ENST00000617771 ANP32BQ92688 251 aaKnown RBP24.22■■□□□ 1.47
VEGFA-228ENST00000617771 SIGLEC10Q96LC7 697 aa24.22■■□□□ 1.47
VEGFA-228ENST00000617771 FBXO6Q9NRD1 293 aaPredicted RBP24.22■■□□□ 1.47
VEGFA-228ENST00000617771 FAM114A2Q9NRY5 505 aa24.22■■□□□ 1.47
VEGFA-228ENST00000617771 KLHL42Q9P2K6 505 aa24.22■■□□□ 1.47
VEGFA-228ENST00000617771 GALPQ9UBC7 116 aa24.22■■□□□ 1.47
VEGFA-228ENST00000617771 ASIC3Q9UHC3 531 aa24.22■■□□□ 1.47
VEGFA-228ENST00000617771 TLN1Q9Y490 2541 aaKnown RBP24.21■■□□□ 1.47
VEGFA-228ENST00000617771 TARM1B6A8C7 271 aa24.21■■□□□ 1.47
VEGFA-228ENST00000617771 K7EM74 188 aa24.21■■□□□ 1.47
VEGFA-228ENST00000617771 CCL11P51671 97 aa24.21■■□□□ 1.47
VEGFA-228ENST00000617771 CHAF1BQ13112 559 aa24.21■■□□□ 1.47
VEGFA-228ENST00000617771 CTBP1Q13363 440 aa24.21■■□□□ 1.47
VEGFA-228ENST00000617771 CYP2A13Q16696 494 aa24.21■■□□□ 1.47
VEGFA-228ENST00000617771 KLHL38Q2WGJ6 581 aa24.21■■□□□ 1.47
VEGFA-228ENST00000617771 TCTE1Q5JU00 501 aa24.21■■□□□ 1.47
VEGFA-228ENST00000617771 RNASEH2BQ5TBB1 312 aaKnown RBP24.21■■□□□ 1.47
VEGFA-228ENST00000617771 PCGF5Q86SE9 256 aa24.21■■□□□ 1.47
VEGFA-228ENST00000617771 OR9A1PQ8NGU1 263 aa24.21■■□□□ 1.47
VEGFA-228ENST00000617771 SLC25A23Q9BV35 468 aa24.21■■□□□ 1.47
VEGFA-228ENST00000617771 COMMD10Q9Y6G5 202 aa24.21■■□□□ 1.47
VEGFA-228ENST00000617771 SPTBP11277 2137 aa24.2■■□□□ 1.47
VEGFA-228ENST00000617771 CATP04040 527 aaKnown RBP24.2■■□□□ 1.46
VEGFA-228ENST00000617771 SLC1A2P43004 574 aa24.2■■□□□ 1.46
VEGFA-228ENST00000617771 CLCN7P51798 805 aa24.2■■□□□ 1.46
VEGFA-228ENST00000617771 NAA25Q14CX7 972 aa24.2■■□□□ 1.46
VEGFA-228ENST00000617771 NKAIN1Q4KMZ8 207 aa24.2■■□□□ 1.46
VEGFA-228ENST00000617771 NEK10Q6ZWH5 1172 aa24.2■■□□□ 1.46
VEGFA-228ENST00000617771 MED25Q71SY5 747 aa24.2■■□□□ 1.46
VEGFA-228ENST00000617771 AGGF1Q8N302 714 aaeCLIP24.2■■□□□ 1.46
VEGFA-228ENST00000617771 TMEM102Q8N9M5 508 aaPredicted RBP24.2■■□□□ 1.46
VEGFA-228ENST00000617771 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.2■■□□□ 1.466e-6■■■■■ 47.7
VEGFA-228ENST00000617771 KCNJ9Q92806 393 aa24.2■■□□□ 1.46
VEGFA-228ENST00000617771 IP6K3Q96PC2 410 aa24.2■■□□□ 1.46
VEGFA-228ENST00000617771 MIPEPQ99797 713 aa24.2■■□□□ 1.46
VEGFA-228ENST00000617771 SELENOSQ9BQE4 189 aa24.2■■□□□ 1.46
VEGFA-228ENST00000617771 DDX47Q9H0S4 455 aaKnown RBP24.2■■□□□ 1.46
VEGFA-228ENST00000617771 G3BP2Q9UN86 482 aaKnown RBP24.2■■□□□ 1.46
VEGFA-228ENST00000617771 PCDHGA9Q9Y5G4 932 aaKnown RBP24.2■■□□□ 1.46
VEGFA-228ENST00000617771 KLK4Q9Y5K2 254 aa24.2■■□□□ 1.46
VEGFA-228ENST00000617771 FAM169AQ9Y6X4 670 aa24.2■■□□□ 1.46
VEGFA-228ENST00000617771 KRT87PA6NCN2 255 aa24.19■■□□□ 1.46
VEGFA-228ENST00000617771 DNALI1O14645 258 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-228ENST00000617771 PSIP1O75475 530 aaKnown RBP24.19■■□□□ 1.46
VEGFA-228ENST00000617771 KLF7O75840 302 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-228ENST00000617771 ALAS2P22557 587 aa24.19■■□□□ 1.46
VEGFA-228ENST00000617771 PSMB5P28074 263 aa24.19■■□□□ 1.46
VEGFA-228ENST00000617771 FOLR3P41439 243 aa24.19■■□□□ 1.46
VEGFA-228ENST00000617771 GRIA3P42263 894 aa24.19■■□□□ 1.46
VEGFA-228ENST00000617771 PGDP52209 483 aa24.19■■□□□ 1.46
VEGFA-228ENST00000617771 RRADP55042 308 aa24.19■■□□□ 1.46
VEGFA-228ENST00000617771 PTK6Q13882 451 aa24.19■■□□□ 1.46
VEGFA-228ENST00000617771 SSPNQ14714 243 aa24.19■■□□□ 1.46
VEGFA-228ENST00000617771 YOD1Q5VVQ6 348 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-228ENST00000617771 TTC29Q8NA56 475 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-228ENST00000617771 OR2L3Q8NG85 312 aa24.19■■□□□ 1.46
VEGFA-228ENST00000617771 GABPB2Q8TAK5 448 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-228ENST00000617771 SLCO2A1Q92959 643 aa24.19■■□□□ 1.46
VEGFA-228ENST00000617771 FAM167BQ9BTA0 163 aa24.19■■□□□ 1.46
VEGFA-228ENST00000617771 PCYOX1Q9UHG3 505 aa24.19■■□□□ 1.46
VEGFA-228ENST00000617771 PTRH2Q9Y3E5 179 aaKnown RBP24.19■■□□□ 1.46
VEGFA-228ENST00000617771 SPTA1P02549 2419 aa24.19■■□□□ 1.46
VEGFA-228ENST00000617771 ARHGEF33A8MVX0 844 aa24.18■■□□□ 1.46
VEGFA-228ENST00000617771 ATXN8OSP0DMR3 200 aa24.18■■□□□ 1.46
VEGFA-228ENST00000617771 PIM1P11309 404 aaPredicted RBP24.18■■□□□ 1.46
VEGFA-228ENST00000617771 PGAM1P18669 254 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms